RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 DNAJB1P25685 340 aa18.13■□□□□ 0.49
CIRBP-233ENST00000591622 CAMK1Q14012 370 aa18.13■□□□□ 0.49
CIRBP-233ENST00000591622 FAM187BQ17R55 369 aa18.13■□□□□ 0.49
CIRBP-233ENST00000591622 NOMO2Q5JPE7 1267 aa18.13■□□□□ 0.49
CIRBP-233ENST00000591622 KCNT2Q6UVM3 1135 aa18.13■□□□□ 0.49
CIRBP-233ENST00000591622 AGMOQ6ZNB7 445 aa18.13■□□□□ 0.49
CIRBP-233ENST00000591622 DAW1Q8N136 415 aa18.13■□□□□ 0.49
CIRBP-233ENST00000591622 SYT2Q8N9I0 419 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-233ENST00000591622 SMG8Q8ND04 991 aaKnown RBP18.13■□□□□ 0.49
CIRBP-233ENST00000591622 DEPTORQ8TB45 409 aa18.13■□□□□ 0.49
CIRBP-233ENST00000591622 HLA-CQ95604 372 aa18.13■□□□□ 0.49
CIRBP-233ENST00000591622 CALML4Q96GE6 196 aa18.13■□□□□ 0.49
CIRBP-233ENST00000591622 EIF2AQ9BY44 585 aaKnown RBP18.13■□□□□ 0.49
CIRBP-233ENST00000591622 NSUN3Q9H649 340 aaKnown RBP18.13■□□□□ 0.49
CIRBP-233ENST00000591622 COG5Q9UP83 839 aa18.13■□□□□ 0.49
CIRBP-233ENST00000591622 HIP1RO75146 1068 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 SSBP05455 408 aaKnown RBP eCLIP18.12■□□□□ 0.49
CIRBP-233ENST00000591622 GUCY2CP25092 1073 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 MARCKSP29966 332 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-233ENST00000591622 EFNA5P52803 228 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 MRPS5P82675 430 aaKnown RBP18.12■□□□□ 0.49
CIRBP-233ENST00000591622 CEBPZQ03701 1054 aaKnown RBP18.12■□□□□ 0.49
CIRBP-233ENST00000591622 UBE3AQ05086 875 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 MAPK6Q16659 721 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 SLC27A1Q6PCB7 646 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 THNSL1Q8IYQ7 743 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 POF1BQ8WVV4 589 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 DRC1Q96MC2 740 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 ZNF558Q96NG5 402 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 USP28Q96RU2 1077 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 TIPINQ9BVW5 301 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 CCDC113Q9H0I3 377 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 RSAD1Q9HA92 442 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 FBXO2Q9UK22 296 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-233ENST00000591622 INPP5FQ9Y2H2 1132 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 IPPQ9Y573 584 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 SRPRBQ9Y5M8 271 aaKnown RBP18.12■□□□□ 0.49
CIRBP-233ENST00000591622 CNTNAP2Q9UHC6 1331 aa18.12■□□□□ 0.49
CIRBP-233ENST00000591622 FNDC1Q4ZHG4 1894 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-233ENST00000591622 PRRC2BQ5JSZ5 2229 aaKnown RBP18.11■□□□□ 0.49
CIRBP-233ENST00000591622 PLA2G4BP0C869 781 aa18.11■□□□□ 0.49
CIRBP-233ENST00000591622 ITGA4P13612 1032 aa18.11■□□□□ 0.49
CIRBP-233ENST00000591622 PPM1AP35813 382 aa18.11■□□□□ 0.49
CIRBP-233ENST00000591622 PBX3P40426 434 aa18.11■□□□□ 0.49
CIRBP-233ENST00000591622 SLC12A3P55017 1021 aa18.11■□□□□ 0.49
CIRBP-233ENST00000591622 MAPK7Q13164 816 aa18.11■□□□□ 0.49
CIRBP-233ENST00000591622 TCEAL5Q5H9L2 206 aa18.11■□□□□ 0.49
CIRBP-233ENST00000591622 CDR2LQ86X02 465 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-233ENST00000591622 ASB2Q96Q27 587 aa18.11■□□□□ 0.49
CIRBP-233ENST00000591622 KIFC3Q9BVG8 833 aa18.11■□□□□ 0.49
CIRBP-233ENST00000591622 TRIM6Q9C030 488 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-233ENST00000591622 UBN1Q9NPG3 1134 aa18.11■□□□□ 0.49
CIRBP-233ENST00000591622 TBC1D13Q9NVG8 400 aa18.11■□□□□ 0.49
CIRBP-233ENST00000591622 KCND2Q9NZV8 630 aa18.11■□□□□ 0.49
CIRBP-233ENST00000591622 MYO9BQ13459 2157 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 TTLL13PA6NNM8 815 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 ACKR2O00590 384 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 CSPG5O95196 566 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 PRKCBP05771 671 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 LIG1P18858 919 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 NPTX2P47972 431 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 ALDH7A1P49419 539 aaKnown RBP18.1■□□□□ 0.49
CIRBP-233ENST00000591622 PEX3P56589 373 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 PLCB3Q01970 1234 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 TFF2Q03403 129 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 PRPF4BQ13523 1007 aaKnown RBP18.1■□□□□ 0.49
CIRBP-233ENST00000591622 SLC39A14Q15043 492 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 KARSQ15046 597 aaKnown RBP18.1■□□□□ 0.49
CIRBP-233ENST00000591622 AAK1Q2M2I8 961 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 TJAP1Q5JTD0 557 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 HACE1Q8IYU2 909 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 RASSF8Q8NHQ8 419 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 URGCPQ8TCY9 931 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 CCSER1Q9C0I3 900 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 RNF39Q9H2S5 420 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 C17orf75Q9HAS0 396 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 SPG21Q9NZD8 308 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 KANSL3Q9P2N6 904 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 LZTS1Q9Y250 596 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 HES2Q9Y543 173 aa18.1■□□□□ 0.49
CIRBP-233ENST00000591622 MORC2Q9Y6X9 1032 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-233ENST00000591622 KIAA1671Q9BY89 1806 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-233ENST00000591622 CCDC169A6NNP5 214 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 SFI1A8K8P3 1242 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 K7ERI5 159 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 NPTXRO95502 500 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 PLCG1P19174 1290 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 IRS1P35568 1242 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 AFF1P51825 1210 aaKnown RBP18.09■□□□□ 0.49
CIRBP-233ENST00000591622 BCAR1P56945 870 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 KRT17Q04695 432 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 RNASELQ05823 741 aaKnown RBP18.09■□□□□ 0.49
CIRBP-233ENST00000591622 RAD51AP2Q09MP3 1159 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 DMP1Q13316 513 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-233ENST00000591622 USP49Q70CQ1 688 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 SPRYD3Q8NCJ5 442 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 MRPS27Q92552 414 aaKnown RBP18.09■□□□□ 0.49
CIRBP-233ENST00000591622 EPSTI1Q96J88 318 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 NXF3Q9H4D5 531 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms