RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 STK33Q9BYT3 514 aa11.76□□□□□ -0.53
LINC01140-210ENST00000590653 CDC42EP4Q9H3Q1 356 aaKnown RBP11.76□□□□□ -0.53
LINC01140-210ENST00000590653 EBF2Q9HAK2 575 aa11.76□□□□□ -0.53
LINC01140-210ENST00000590653 RABGAP1Q9Y3P9 1069 aa11.76□□□□□ -0.53
LINC01140-210ENST00000590653 PFASO15067 1338 aa11.76□□□□□ -0.53
LINC01140-210ENST00000590653 EXOC3O60645 756 aa11.76□□□□□ -0.53
LINC01140-210ENST00000590653 TTLL1O95922 423 aa11.76□□□□□ -0.53
LINC01140-210ENST00000590653 ATP11AP98196 1134 aa11.76□□□□□ -0.53
LINC01140-210ENST00000590653 TAF11Q15544 211 aa11.76□□□□□ -0.53
LINC01140-210ENST00000590653 PTF1AQ7RTS3 328 aa11.76□□□□□ -0.53
LINC01140-210ENST00000590653 VSIG1Q86XK7 387 aa11.76□□□□□ -0.53
LINC01140-210ENST00000590653 SLC30A5Q8TAD4 765 aa11.76□□□□□ -0.53
LINC01140-210ENST00000590653 TMEM237Q96Q45 408 aa11.76□□□□□ -0.53
LINC01140-210ENST00000590653 TGS1Q96RS0 853 aaKnown RBP11.76□□□□□ -0.53
LINC01140-210ENST00000590653 STMN4Q9H169 189 aaPredicted RBP11.76□□□□□ -0.53
LINC01140-210ENST00000590653 MYH14Q7Z406 1995 aaKnown RBP11.76□□□□□ -0.53
LINC01140-210ENST00000590653 GSTTP1A0A1W2PQM5 241 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 EME2A4GXA9 379 aaPredicted RBP11.75□□□□□ -0.53
LINC01140-210ENST00000590653 C6orf229H3BNL8 230 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 CLDN3O15551 220 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 PDHA1P08559 390 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 CHRNA3P32297 505 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 CHKAP35790 457 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 SCNN1DP51172 638 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 NPEPPSP55786 919 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 MPP2Q14168 576 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 ZNF449Q6P9G9 518 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 KAT5Q92993 513 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 CD209Q9NNX6 404 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 FRMD4BQ9Y2L6 1034 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 ANKRD62A6NC57 917 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 TISP43B9A030 160 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 GTF2IP78347 998 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 MYL7Q01449 175 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 ZNF268Q14587 947 aaPredicted RBP11.75□□□□□ -0.53
LINC01140-210ENST00000590653 PHLDB3Q6NSJ2 640 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 HS2ST1Q7LGA3 356 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 PRUNE1Q86TP1 453 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 KIAA0825Q8IV33 1275 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 RPUSD2Q8IZ73 545 aaKnown RBP11.75□□□□□ -0.53
LINC01140-210ENST00000590653 SYT2Q8N9I0 419 aaPredicted RBP11.75□□□□□ -0.53
LINC01140-210ENST00000590653 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
LINC01140-210ENST00000590653 P2RX7Q99572 595 aaKnown RBP11.75□□□□□ -0.53
LINC01140-210ENST00000590653 KLHL14Q9P2G3 628 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 INTUQ9ULD6 942 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 ROBO3Q96MS0 1386 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 FAM86B1E9PN63 330 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 UBAP1LF5GYI3 381 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 EML1O00423 815 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 SPAG7O75391 227 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 FAM86B2P0C5J1 330 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 GJC1P36383 396 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 RHBDL3P58872 404 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 SATB1Q01826 763 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 RBM26Q5T8P6 1007 aaKnown RBP11.75□□□□□ -0.53
LINC01140-210ENST00000590653 CYP4F22Q6NT55 531 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 ZBTB10Q96DT7 871 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 IFT74Q96LB3 600 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 AGPAT1Q99943 283 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 SH2D3AQ9BRG2 576 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 NYXQ9GZU5 481 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 MTUS1Q9ULD2 1270 aa11.75□□□□□ -0.53
LINC01140-210ENST00000590653 GPR75-ASB3A0A0A6YYF3 556 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 THAP12O43422 761 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 CALCAP01258 141 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 SMARCA1P28370 1054 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 COILP38432 576 aaPredicted RBP11.74□□□□□ -0.53
LINC01140-210ENST00000590653 GCLMP48507 274 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 TCP10Q12799 353 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 ANKRD20A2Q5SQ80 823 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 ANKRD20A1Q5TYW2 823 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 ANKRD20A3Q5VUR7 823 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 FOXR2Q6PJQ5 311 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 CYP4X1Q8N118 509 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 C9orf72Q96LT7 481 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 ADAM22Q9P0K1 906 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 PKD2L1Q9P0L9 805 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 PITPNM2Q9BZ72 1349 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 hCG_1984214I3L0E3 225 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 PODXLO00592 558 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 PPP1R12AO14974 1030 aaPredicted RBP11.74□□□□□ -0.53
LINC01140-210ENST00000590653 RARGP13631 454 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 ATP2A2P16615 1042 aaKnown RBP11.74□□□□□ -0.53
LINC01140-210ENST00000590653 CLK2P49760 499 aaKnown RBP11.74□□□□□ -0.53
LINC01140-210ENST00000590653 CACNB3P54284 484 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 SLC8A3P57103 927 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 SESN3P58005 492 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 DLG4P78352 724 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 SLMAPQ14BN4 828 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 PPP2R5EQ16537 467 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 HYIQ5T013 277 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 CRELD2Q6UXH1 353 aaPredicted RBP11.74□□□□□ -0.53
LINC01140-210ENST00000590653 SLFN12Q8IYM2 578 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 ZNF713Q8N859 430 aaPredicted RBP11.74□□□□□ -0.53
LINC01140-210ENST00000590653 RPGRQ92834 1020 aaKnown RBP11.74□□□□□ -0.53
LINC01140-210ENST00000590653 CRAMP1Q96RY5 1269 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 ZSWIM1Q9BR11 485 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 HEMGNQ9BXL5 484 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 KCNMB3Q9NPA1 279 aa11.74□□□□□ -0.53
LINC01140-210ENST00000590653 APEX2Q9UBZ4 518 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms