RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 PCDHB13Q9Y5F0 798 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 UBE4BO95155 1302 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 CNTNAP2Q9UHC6 1331 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 TSPAN1O60635 241 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 GCNT3O95395 438 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 PIGRP01833 764 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 EDN1P05305 212 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 PRKCBP05771 671 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 MYBP10242 640 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 CSF2RAP15509 400 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 SYN1P17600 705 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 CD52P31358 61 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 PAK2Q13177 524 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 PPIGQ13427 754 aaKnown RBP eCLIP13.26□□□□□ -0.29
APOC1-206ENST00000590334 MORC3Q14149 939 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 BMT2Q1RMZ1 405 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 ZC2HC1CQ53FD0 456 aaPredicted RBP13.26□□□□□ -0.29
APOC1-206ENST00000590334 L1TD1Q5T7N2 865 aaKnown RBP13.26□□□□□ -0.29
APOC1-206ENST00000590334 STXBP4Q6ZWJ1 553 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 CATSPER4Q7RTX7 472 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 MAP4K3Q8IVH8 894 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 RPUSD2Q8IZ73 545 aaKnown RBP13.26□□□□□ -0.29
APOC1-206ENST00000590334 GLIS3Q8NEA6 775 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 APBB2Q92870 758 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 SYAP1Q96A49 352 aaPredicted RBP13.26□□□□□ -0.29
APOC1-206ENST00000590334 IFIH1Q9BYX4 1025 aaKnown RBP13.26□□□□□ -0.29
APOC1-206ENST00000590334 SLC39A2Q9NP94 309 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 IL23AQ9NPF7 189 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 AGPAT5Q9NUQ2 364 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 MAN1B1Q9UKM7 699 aa13.26□□□□□ -0.29
APOC1-206ENST00000590334 ERLIN2O94905 339 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 BMP6P22004 513 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 FGFR4P22455 802 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 HOXA11P31270 313 aaPredicted RBP13.25□□□□□ -0.29
APOC1-206ENST00000590334 HOXD13P35453 343 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 FPGSQ05932 587 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 STRN3Q13033 797 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 PRPF4BQ13523 1007 aaKnown RBP13.25□□□□□ -0.29
APOC1-206ENST00000590334 DSC3Q14574 896 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 CAVIN1Q6NZI2 390 aaKnown RBP13.25□□□□□ -0.29
APOC1-206ENST00000590334 CNKSR3Q6P9H4 555 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 ZPBP2Q6X784 338 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 SCFD1Q8WVM8 642 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 SEPT8Q92599 483 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 TRAIPQ9BWF2 469 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 FTHL17Q9BXU8 183 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 TMX1Q9H3N1 280 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 CHST12Q9NRB3 414 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 ZMYND8Q9ULU4 1186 aaPredicted RBP13.25□□□□□ -0.29
APOC1-206ENST00000590334 RALGAPA2Q2PPJ7 1873 aa13.25□□□□□ -0.29
APOC1-206ENST00000590334 ZMYM2Q9UBW7 1377 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 A0A1B0GUA9 196 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 TTLL13PA6NNM8 815 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 B4GALT5O43286 388 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 CAPN15O75808 1086 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 ARF4P18085 180 aaPredicted RBP13.24□□□□□ -0.29
APOC1-206ENST00000590334 NCBP1Q09161 790 aaKnown RBP13.24□□□□□ -0.29
APOC1-206ENST00000590334 KCNA1Q09470 495 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 TCTN1Q2MV58 587 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 DEFB128Q7Z7B8 93 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 GUF1Q8N442 669 aaKnown RBP13.24□□□□□ -0.29
APOC1-206ENST00000590334 DBF4BQ8NFT6 615 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 CCDC51Q96ER9 411 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 ACCSQ96QU6 501 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 ACO2Q99798 780 aaKnown RBP13.24□□□□□ -0.29
APOC1-206ENST00000590334 LBHD1Q9BQE6 289 aaPredicted RBP13.24□□□□□ -0.29
APOC1-206ENST00000590334 MRPL4Q9BYD3 311 aaKnown RBP13.24□□□□□ -0.29
APOC1-206ENST00000590334 TMEM206Q9H813 350 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 TNFSF13BQ9Y275 285 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 GDAQ9Y2T3 454 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 ANK1P16157 1881 aa13.24□□□□□ -0.29
APOC1-206ENST00000590334 PDCD11Q14690 1871 aaKnown RBP13.24□□□□□ -0.29
APOC1-206ENST00000590334 LAMA2P24043 3122 aaKnown RBP13.23□□□□□ -0.29
APOC1-206ENST00000590334 MGEA5O60502 916 aa13.23□□□□□ -0.29
APOC1-206ENST00000590334 PRPF6O94906 941 aaKnown RBP13.23□□□□□ -0.29
APOC1-206ENST00000590334 LETM1O95202 739 aaPredicted RBP13.23□□□□□ -0.29
APOC1-206ENST00000590334 KIF20AO95235 890 aa13.23□□□□□ -0.29
APOC1-206ENST00000590334 PROZP22891 400 aa13.23□□□□□ -0.29
APOC1-206ENST00000590334 PPP1R2P41236 205 aa13.23□□□□□ -0.29
APOC1-206ENST00000590334 NFX1Q12986 1120 aaKnown RBP13.23□□□□□ -0.29
APOC1-206ENST00000590334 NOTUMQ6P988 496 aa13.23□□□□□ -0.29
APOC1-206ENST00000590334 C16orf59Q7L2K0 433 aa13.23□□□□□ -0.29
APOC1-206ENST00000590334 MYOCDQ8IZQ8 938 aa13.23□□□□□ -0.29
APOC1-206ENST00000590334 TARS2Q9BW92 718 aaKnown RBP13.23□□□□□ -0.29
APOC1-206ENST00000590334 PDZD7Q9H5P4 517 aa13.23□□□□□ -0.29
APOC1-206ENST00000590334 PTPRHQ9HD43 1115 aa13.23□□□□□ -0.29
APOC1-206ENST00000590334 RGS18Q9NS28 235 aa13.23□□□□□ -0.29
APOC1-206ENST00000590334 EXOC7Q9UPT5 735 aa13.23□□□□□ -0.29
APOC1-206ENST00000590334 STYXL1Q9Y6J8 313 aa13.23□□□□□ -0.29
APOC1-206ENST00000590334 CITO14578 2027 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 TTC3P53804 2025 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 ABHD14A-ACY1A0A1B0GW23 586 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 BIN1O00499 593 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 ABLIM1O14639 778 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 N4BP3O15049 544 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 TGFB1I1O43294 461 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 EFCAB14O75071 495 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 TOM1L1O75674 476 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 BAIAP3O94812 1187 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 PRCPP42785 496 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms