RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 COL4A6Q14031 1691 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.36□□□□□ -0.27
TPM4-212ENST00000590180 NT5C1B-RDH14C9J2C7 533 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 B4GALT5O43286 388 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 BMP15O95972 392 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 HSP90AA1P07900 732 aaKnown RBP13.36□□□□□ -0.27
TPM4-212ENST00000590180 BMP1P13497 986 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 ARF4P18085 180 aaPredicted RBP13.36□□□□□ -0.27
TPM4-212ENST00000590180 IRS1P35568 1242 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 UBA7P41226 1012 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 UBE3AQ05086 875 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 AGMOQ6ZNB7 445 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 RBM23Q86U06 439 aaKnown RBP13.36□□□□□ -0.27
TPM4-212ENST00000590180 CABP7Q86V35 215 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 CDR2LQ86X02 465 aaPredicted RBP13.36□□□□□ -0.27
TPM4-212ENST00000590180 URGCPQ8TCY9 931 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 KIFAP3Q92845 792 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 CCDC51Q96ER9 411 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 PNMA5Q96PV4 448 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 FAM193BQ96PV7 902 aaPredicted RBP13.36□□□□□ -0.27
TPM4-212ENST00000590180 NFKBIZQ9BYH8 718 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 NT5C3AQ9H0P0 336 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 RNF39Q9H2S5 420 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 RSAD1Q9HA92 442 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 PRMT7Q9NVM4 692 aaPredicted RBP13.36□□□□□ -0.27
TPM4-212ENST00000590180 CLDND1Q9NY35 253 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 NCOR1O75376 2440 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 PRUNE2Q8WUY3 3088 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 NLRC5Q86WI3 1866 aa13.36□□□□□ -0.27
TPM4-212ENST00000590180 A0A1B0GUA9 196 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 CCDC169A6NNP5 214 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 ZC3H11AO75152 810 aaKnown RBP eCLIP13.35□□□□□ -0.27
TPM4-212ENST00000590180 NPTXRO95502 500 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 NCLP19338 710 aaKnown RBP13.35□□□□□ -0.27
TPM4-212ENST00000590180 GTF2F1P35269 517 aaKnown RBP eCLIP13.35□□□□□ -0.27
TPM4-212ENST00000590180 PPM1AP35813 382 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 NAMPTP43490 491 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 BCAR1P56945 870 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 ERVFC1P60507 584 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 PLCB3Q01970 1234 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 CEBPZQ03701 1054 aaKnown RBP13.35□□□□□ -0.27
TPM4-212ENST00000590180 HYAL1Q12794 435 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 MAPK6Q16659 721 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 AMHR2Q16671 573 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 RINT1Q6NUQ1 792 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 FAM173BQ6P4H8 233 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 KCNK18Q7Z418 384 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 HACE1Q8IYU2 909 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 SMG8Q8ND04 991 aaKnown RBP13.35□□□□□ -0.27
TPM4-212ENST00000590180 RASSF8Q8NHQ8 419 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 ADAMTS19Q8TE59 1207 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 RSPH1Q8WYR4 309 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 MRPS27Q92552 414 aaKnown RBP13.35□□□□□ -0.27
TPM4-212ENST00000590180 CALML4Q96GE6 196 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 AK8Q96MA6 479 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 FZD8Q9H461 694 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 NRDE2Q9H7Z3 1164 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 TLE6Q9H808 572 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 UBN1Q9NPG3 1134 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 TLR9Q9NR96 1032 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 TBC1D13Q9NVG8 400 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 KANSL3Q9P2N6 904 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 MTMR6Q9Y217 621 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 HES2Q9Y543 173 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 IPPQ9Y573 584 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 CLIC4Q9Y696 253 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 FNDC1Q4ZHG4 1894 aaPredicted RBP13.35□□□□□ -0.27
TPM4-212ENST00000590180 CNTNAP2Q9UHC6 1331 aa13.35□□□□□ -0.27
TPM4-212ENST00000590180 RALGAPA2Q2PPJ7 1873 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 H3BQ06 376 aaPredicted RBP13.34□□□□□ -0.27
TPM4-212ENST00000590180 K7ERI5 159 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 STX6O43752 255 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 HIP1RO75146 1068 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 POMCP01189 267 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 ALDH2P05091 517 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 PRKCBP05771 671 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 NRIP1P48552 1158 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 PEX3P56589 373 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 RESTQ13127 1097 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 PRPF4BQ13523 1007 aaKnown RBP13.34□□□□□ -0.27
TPM4-212ENST00000590180 SLC27A1Q6PCB7 646 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 C1orf186Q6ZWK4 172 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 TMC7Q7Z402 723 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 SLC39A11Q8N1S5 342 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 PABPC5Q96DU9 382 aaKnown RBP13.34□□□□□ -0.27
TPM4-212ENST00000590180 TMEM169Q96HH4 297 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 PRIMPOLQ96LW4 560 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 GAD1Q99259 594 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 KIFC3Q9BVG8 833 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 RUSC1Q9BVN2 902 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 PARP2Q9UGN5 583 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 LZTS1Q9Y250 596 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 USP20Q9Y2K6 914 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 PCDHGC5Q9Y5F6 944 aa13.34□□□□□ -0.27
TPM4-212ENST00000590180 COL4A4P53420 1690 aaPredicted RBP13.34□□□□□ -0.27
TPM4-212ENST00000590180 SFI1A8K8P3 1242 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 ACKR2O00590 384 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 PER2O15055 1255 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 GALTP07902 379 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 PLA2G4BP0C869 781 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms