RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 CATSPER4Q7RTX7 472 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 FAM228AQ86W67 206 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 MAP4K3Q8IVH8 894 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 NELFCDQ8IXH7 590 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 GUF1Q8N442 669 aaKnown RBP16.68■□□□□ 0.26
ATG4D-211ENST00000589753 SCLYQ96I15 445 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 PRIMPOLQ96LW4 560 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 OSBPL7Q9BZF2 842 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 TMEM206Q9H813 350 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 EXOC7Q9UPT5 735 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 MAPK8IP1Q9UQF2 711 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 DNAH12Q6ZR08 3092 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 ACKR2O00590 384 aa16.67■□□□□ 0.26
ATG4D-211ENST00000589753 GPR182O15218 404 aa16.67■□□□□ 0.26
ATG4D-211ENST00000589753 TSPAN1O60635 241 aa16.67■□□□□ 0.26
ATG4D-211ENST00000589753 NBNO60934 754 aa16.67■□□□□ 0.26
ATG4D-211ENST00000589753 ITGB8P26012 769 aa16.67■□□□□ 0.26
ATG4D-211ENST00000589753 PPP1R2P41236 205 aa16.67■□□□□ 0.26
ATG4D-211ENST00000589753 NCBP1Q09161 790 aaKnown RBP16.67■□□□□ 0.26
ATG4D-211ENST00000589753 KCNA1Q09470 495 aa16.67■□□□□ 0.26
ATG4D-211ENST00000589753 PAK2Q13177 524 aa16.67■□□□□ 0.26
ATG4D-211ENST00000589753 PRPF4BQ13523 1007 aaKnown RBP16.67■□□□□ 0.26
ATG4D-211ENST00000589753 STIM1Q13586 685 aa16.67■□□□□ 0.26
ATG4D-211ENST00000589753 AMHR2Q16671 573 aa16.67■□□□□ 0.26
ATG4D-211ENST00000589753 SYCP3Q8IZU3 236 aa16.67■□□□□ 0.26
ATG4D-211ENST00000589753 MLKLQ8NB16 471 aa16.67■□□□□ 0.26
ATG4D-211ENST00000589753 BICD1Q96G01 975 aa16.67■□□□□ 0.26
ATG4D-211ENST00000589753 MRPL4Q9BYD3 311 aaKnown RBP16.67■□□□□ 0.26
ATG4D-211ENST00000589753 GZF1Q9H116 711 aaPredicted RBP16.67■□□□□ 0.26
ATG4D-211ENST00000589753 AGO3Q9H9G7 860 aaKnown RBP16.67■□□□□ 0.26
ATG4D-211ENST00000589753 ST3GAL5Q9UNP4 418 aa16.67■□□□□ 0.26
ATG4D-211ENST00000589753 B4GALT5O43286 388 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 EDN1P05305 212 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 CD52P31358 61 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 RFC2P35250 354 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 TYRO3Q06418 890 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 NFX1Q12986 1120 aaKnown RBP16.66■□□□□ 0.26
ATG4D-211ENST00000589753 STX1AQ16623 288 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 KNOP1Q1ED39 458 aaKnown RBP16.66■□□□□ 0.26
ATG4D-211ENST00000589753 TMEM132AQ24JP5 1023 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 DPCR1Q3MIW9 517 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 MFSD5Q6N075 450 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 ADSSL1Q8N142 457 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 TMEM199Q8N511 208 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 ERVK-5Q9HDB9 667 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 ANO10Q9NW15 660 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 DACH1Q9UI36 760 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 PADI3Q9ULW8 664 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 CNTNAP2Q9UHC6 1331 aa16.66■□□□□ 0.26
ATG4D-211ENST00000589753 PPP1R3GB7ZBB8 358 aa16.65■□□□□ 0.26
ATG4D-211ENST00000589753 HNRNPDLO14979 420 aaKnown RBP16.65■□□□□ 0.26
ATG4D-211ENST00000589753 CXCL10P02778 98 aa16.65■□□□□ 0.26
ATG4D-211ENST00000589753 CCDC192P0DO97 292 aa16.65■□□□□ 0.26
ATG4D-211ENST00000589753 CD44P16070 742 aaKnown RBP16.65■□□□□ 0.26
ATG4D-211ENST00000589753 ARF4P18085 180 aaPredicted RBP16.65■□□□□ 0.26
ATG4D-211ENST00000589753 AXLP30530 894 aa16.65■□□□□ 0.26
ATG4D-211ENST00000589753 HOXD13P35453 343 aa16.65■□□□□ 0.26
ATG4D-211ENST00000589753 LIG4P49917 911 aa16.65■□□□□ 0.26
ATG4D-211ENST00000589753 GPNMBQ14956 572 aa16.65■□□□□ 0.26
ATG4D-211ENST00000589753 ZPBP2Q6X784 338 aa16.65■□□□□ 0.26
ATG4D-211ENST00000589753 DHTKD1Q96HY7 919 aaPredicted RBP16.65■□□□□ 0.26
ATG4D-211ENST00000589753 ACO2Q99798 780 aaKnown RBP16.65■□□□□ 0.26
ATG4D-211ENST00000589753 TARS2Q9BW92 718 aaKnown RBP16.65■□□□□ 0.26
ATG4D-211ENST00000589753 IFIH1Q9BYX4 1025 aaKnown RBP16.65■□□□□ 0.26
ATG4D-211ENST00000589753 GBP3Q9H0R5 595 aa16.65■□□□□ 0.26
ATG4D-211ENST00000589753 AGPAT5Q9NUQ2 364 aa16.65■□□□□ 0.26
ATG4D-211ENST00000589753 USP20Q9Y2K6 914 aa16.65■□□□□ 0.26
ATG4D-211ENST00000589753 ZMYM2Q9UBW7 1377 aa16.64■□□□□ 0.26
ATG4D-211ENST00000589753 TTLL13PA6NNM8 815 aa16.64■□□□□ 0.25
ATG4D-211ENST00000589753 PSMA7O14818 248 aa16.64■□□□□ 0.25
ATG4D-211ENST00000589753 PIGRP01833 764 aa16.64■□□□□ 0.25
ATG4D-211ENST00000589753 SYN1P17600 705 aa16.64■□□□□ 0.25
ATG4D-211ENST00000589753 PLEKHG4Q58EX7 1191 aa16.64■□□□□ 0.25
ATG4D-211ENST00000589753 ATF7IP2Q5U623 682 aa16.64■□□□□ 0.25
ATG4D-211ENST00000589753 KLHL10Q6JEL2 608 aa16.64■□□□□ 0.25
ATG4D-211ENST00000589753 DEFB128Q7Z7B8 93 aa16.64■□□□□ 0.25
ATG4D-211ENST00000589753 SEPT8Q92599 483 aa16.64■□□□□ 0.25
ATG4D-211ENST00000589753 APBB2Q92870 758 aa16.64■□□□□ 0.25
ATG4D-211ENST00000589753 CPB2Q96IY4 423 aa16.64■□□□□ 0.25
ATG4D-211ENST00000589753 FUCA2Q9BTY2 467 aa16.64■□□□□ 0.25
ATG4D-211ENST00000589753 IKZF4Q9H2S9 585 aa16.64■□□□□ 0.25
ATG4D-211ENST00000589753 KCTD10Q9H3F6 313 aa16.64■□□□□ 0.25
ATG4D-211ENST00000589753 PIN4Q9Y237 131 aaKnown RBP16.64■□□□□ 0.25
ATG4D-211ENST00000589753 A0A1B0GUA9 196 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 RBAK-RBAKDNI3L0D1 243 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 N4BP3O15049 544 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 TGFB1I1O43294 461 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 TOM1L1O75674 476 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 CSF2RAP15509 400 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 HOXA11P31270 313 aaPredicted RBP16.63■□□□□ 0.25
ATG4D-211ENST00000589753 NOTUMQ6P988 496 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 HS2ST1Q7LGA3 356 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 DBF4BQ8NFT6 615 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 BADQ92934 168 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 TMX1Q9H3N1 280 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 SEMA6BQ9H3T3 888 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 CHST12Q9NRB3 414 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 TYW1Q9NV66 732 aaKnown RBP16.63■□□□□ 0.25
ATG4D-211ENST00000589753 ZMYND8Q9ULU4 1186 aaPredicted RBP16.63■□□□□ 0.25
ATG4D-211ENST00000589753 CTNND2Q9UQB3 1225 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms