RNA–Protein interactions for RNA: ENST00000589737.5

POLR2E-206, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-206ENST00000589737 CNTNAP2Q9UHC6 1331 aa16.9■□□□□ 0.3
POLR2E-206ENST00000589737 CPLX1O14810 134 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 QARSP47897 775 aaKnown RBP16.89■□□□□ 0.29
POLR2E-206ENST00000589737 CLCN4P51793 760 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 NPEPPSP55786 919 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 UBXN11Q5T124 520 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 ASTLQ6HA08 431 aaPredicted RBP16.89■□□□□ 0.29
POLR2E-206ENST00000589737 KRT25Q7Z3Z0 450 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 SRGAP1Q7Z6B7 1085 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 MRPL10Q7Z7H8 261 aaKnown RBP16.89■□□□□ 0.29
POLR2E-206ENST00000589737 GPR149Q86SP6 731 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 ZNF579Q8NAF0 562 aaKnown RBP16.89■□□□□ 0.29
POLR2E-206ENST00000589737 SLC7A3Q8WY07 619 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 ZNF274Q96GC6 653 aaPredicted RBP16.89■□□□□ 0.29
POLR2E-206ENST00000589737 TMEM175Q9BSA9 504 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 MINDY3Q9H8M7 445 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 RSAD1Q9HA92 442 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 WRAP73Q9P2S5 460 aaPredicted RBP16.89■□□□□ 0.29
POLR2E-206ENST00000589737 STK39Q9UEW8 545 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 LIMD1Q9UGP4 676 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 PPME1Q9Y570 386 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 GVINP1Q7Z2Y8 2422 aa16.89■□□□□ 0.29
POLR2E-206ENST00000589737 DDHD2O94830 711 aa16.88■□□□□ 0.29
POLR2E-206ENST00000589737 CNPP09543 421 aaKnown RBP16.88■□□□□ 0.29
POLR2E-206ENST00000589737 HOXA11P31270 313 aaPredicted RBP16.88■□□□□ 0.29
POLR2E-206ENST00000589737 AFF1P51825 1210 aaKnown RBP16.88■□□□□ 0.29
POLR2E-206ENST00000589737 CWF19L1Q69YN2 538 aaKnown RBP16.88■□□□□ 0.29
POLR2E-206ENST00000589737 CCDC149Q6ZUS6 474 aa16.88■□□□□ 0.29
POLR2E-206ENST00000589737 PSPC1Q8WXF1 523 aaKnown RBP16.88■□□□□ 0.29
POLR2E-206ENST00000589737 KLHL5Q96PQ7 755 aa16.88■□□□□ 0.29
POLR2E-206ENST00000589737 EMILIN2Q9BXX0 1053 aa16.88■□□□□ 0.29
POLR2E-206ENST00000589737 FANCMQ8IYD8 2048 aa16.87■□□□□ 0.29
POLR2E-206ENST00000589737 EPB41L2O43491 1005 aaKnown RBP16.87■□□□□ 0.29
POLR2E-206ENST00000589737 DKC1O60832 514 aaKnown RBP eCLIP16.87■□□□□ 0.29
POLR2E-206ENST00000589737 LILRB3O75022 631 aa16.87■□□□□ 0.29
POLR2E-206ENST00000589737 SSBP05455 408 aaKnown RBP eCLIP16.87■□□□□ 0.29
POLR2E-206ENST00000589737 RFC5P40937 340 aa16.87■□□□□ 0.29
POLR2E-206ENST00000589737 NBL1P41271 181 aa16.87■□□□□ 0.29
POLR2E-206ENST00000589737 LETM2Q2VYF4 491 aa16.87■□□□□ 0.29
POLR2E-206ENST00000589737 C15orf39Q6ZRI6 1047 aa16.87■□□□□ 0.29
POLR2E-206ENST00000589737 PRPF31Q8WWY3 499 aaKnown RBP16.87■□□□□ 0.29
POLR2E-206ENST00000589737 TMEM143Q96AN5 459 aa16.87■□□□□ 0.29
POLR2E-206ENST00000589737 CEP170P1Q96L14 293 aa16.87■□□□□ 0.29
POLR2E-206ENST00000589737 FAM20AQ96MK3 541 aa16.87■□□□□ 0.29
POLR2E-206ENST00000589737 PHF20Q9BVI0 1012 aa16.87■□□□□ 0.29
POLR2E-206ENST00000589737 MARCH5Q9NX47 278 aa16.87■□□□□ 0.29
POLR2E-206ENST00000589737 KANSL3Q9P2N6 904 aa16.87■□□□□ 0.29
POLR2E-206ENST00000589737 INPPL1O15357 1258 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 GAS2O43903 313 aaKnown RBP16.86■□□□□ 0.29
POLR2E-206ENST00000589737 POMCP01189 267 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 P4HBP07237 508 aaKnown RBP16.86■□□□□ 0.29
POLR2E-206ENST00000589737 GCFC2P16383 781 aaKnown RBP16.86■□□□□ 0.29
POLR2E-206ENST00000589737 NCLP19338 710 aaKnown RBP16.86■□□□□ 0.29
POLR2E-206ENST00000589737 KLRC2P26717 231 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 CLCN5P51795 746 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 LAMTOR4Q0VGL1 99 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 EMC2Q15006 297 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 PPP4R3AQ6IN85 833 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 CPLX2Q6PUV4 134 aaKnown RBP16.86■□□□□ 0.29
POLR2E-206ENST00000589737 OTOP3Q7RTS5 596 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 NEK8Q86SG6 692 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 C4orf19Q8IY42 314 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 EXOC8Q8IYI6 725 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 RNF168Q8IYW5 571 aaPredicted RBP16.86■□□□□ 0.29
POLR2E-206ENST00000589737 ACSF2Q96CM8 615 aaPredicted RBP16.86■□□□□ 0.29
POLR2E-206ENST00000589737 LARP6Q9BRS8 491 aaKnown RBP16.86■□□□□ 0.29
POLR2E-206ENST00000589737 LXNQ9BS40 222 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 HERC2P3Q9BVR0 1158 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 MFSD1Q9H3U5 465 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 MRPL17Q9NRX2 175 aaKnown RBP16.86■□□□□ 0.29
POLR2E-206ENST00000589737 BMP2KQ9NSY1 1161 aaPredicted RBP16.86■□□□□ 0.29
POLR2E-206ENST00000589737 DUSP12Q9UNI6 340 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 KCNJ14Q9UNX9 436 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 FAN1Q9Y2M0 1017 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 CYP46A1Q9Y6A2 500 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 MYH15Q9Y2K3 1946 aa16.86■□□□□ 0.29
POLR2E-206ENST00000589737 CCDC194A0A1B0GVG4 234 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 SPDYE4A6NLX3 237 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 NRP1O14786 923 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 TBX3O15119 743 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 EFEMP2O95967 443 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 SOD2P04179 222 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 SRGAP2CP0DJJ0 459 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 STK3Q13188 491 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 ASCL5Q7RTU5 278 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 FERMT3Q86UX7 667 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 RNF149Q8NC42 400 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 SMG8Q8ND04 991 aaKnown RBP16.85■□□□□ 0.29
POLR2E-206ENST00000589737 CMASQ8NFW8 434 aaPredicted RBP16.85■□□□□ 0.29
POLR2E-206ENST00000589737 TCP11Q8WWU5 503 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 HAS1Q92839 578 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 FAM193BQ96PV7 902 aaPredicted RBP16.85■□□□□ 0.29
POLR2E-206ENST00000589737 TM6SF1Q9BZW5 370 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 STK36Q9NRP7 1315 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 CACNA1AO00555 2505 aa16.85■□□□□ 0.29
POLR2E-206ENST00000589737 VWA8A3KMH1 1905 aa16.84■□□□□ 0.29
POLR2E-206ENST00000589737 MIA3Q5JRA6 1907 aa16.84■□□□□ 0.29
POLR2E-206ENST00000589737 TRIP11Q15643 1979 aa16.84■□□□□ 0.29
POLR2E-206ENST00000589737 PRR23AA6NEV1 266 aa16.84■□□□□ 0.29
POLR2E-206ENST00000589737 URODP06132 367 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms