RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 FZD8Q9H461 694 aa15.5■□□□□ 0.07
CCDC130-208ENST00000588071 PRDM5Q9NQX1 630 aaPredicted RBP15.5■□□□□ 0.07
CCDC130-208ENST00000588071 CTNND2Q9UQB3 1225 aa15.5■□□□□ 0.07
CCDC130-208ENST00000588071 BICDL2A1A5D9 508 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 PITPNM1O00562 1244 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 ACKR2O00590 384 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 CALUO43852 315 aaPredicted RBP15.49■□□□□ 0.07
CCDC130-208ENST00000588071 FGFR4P22455 802 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 CCNE1P24864 410 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 HOXD13P35453 343 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 LIG4P49917 911 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 STX17P56962 302 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 RBL2Q08999 1139 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 NFX1Q12986 1120 aaKnown RBP15.49■□□□□ 0.07
CCDC130-208ENST00000588071 PAK1Q13153 545 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 FAM187BQ17R55 369 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 C11orf57Q6ZUT1 292 aaPredicted RBP15.49■□□□□ 0.07
CCDC130-208ENST00000588071 LRRC8DQ7L1W4 858 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 HS2ST1Q7LGA3 356 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 TAS1R3Q7RTX0 852 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 USP38Q8NB14 1042 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 TMEM40Q8WWA1 233 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 P2RX5Q93086 422 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 PRIMPOLQ96LW4 560 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 HTATIP2Q9BUP3 242 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 NOC4LQ9BVI4 516 aaKnown RBP15.49■□□□□ 0.07
CCDC130-208ENST00000588071 CCDC113Q9H0I3 377 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 GBP3Q9H0R5 595 aa15.49■□□□□ 0.07
CCDC130-208ENST00000588071 NOC2LQ9Y3T9 749 aaKnown RBP15.49■□□□□ 0.07
CCDC130-208ENST00000588071 HNRNPDLO14979 420 aaKnown RBP15.48■□□□□ 0.07
CCDC130-208ENST00000588071 GPR182O15218 404 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 CAVIN2O95810 425 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 IQCF3P0C7M6 154 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 ERCC5P28715 1186 aaPredicted RBP15.48■□□□□ 0.07
CCDC130-208ENST00000588071 MATR3P43243 847 aaKnown RBP eCLIP15.48■□□□□ 0.07
CCDC130-208ENST00000588071 TPD52L1Q16890 204 aaPredicted RBP15.48■□□□□ 0.07
CCDC130-208ENST00000588071 FBXO47Q5MNV8 452 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 PPP4R3CPQ6ZMV5 832 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 MAP4K3Q8IVH8 894 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 TCHPQ9BT92 498 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 TARS2Q9BW92 718 aaKnown RBP15.48■□□□□ 0.07
CCDC130-208ENST00000588071 KCTD10Q9H3F6 313 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 SEMA6BQ9H3T3 888 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 TYW1Q9NV66 732 aaKnown RBP15.48■□□□□ 0.07
CCDC130-208ENST00000588071 PRKAG2Q9UGJ0 569 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 RWDD2AQ9UIY3 292 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 TBX21Q9UL17 535 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 ST3GAL5Q9UNP4 418 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 USP20Q9Y2K6 914 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 SQORQ9Y6N5 450 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 ALPK3Q96L96 1907 aa15.48■□□□□ 0.07
CCDC130-208ENST00000588071 TRIM49BA6NDI0 452 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 PDXKO00764 312 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 TGFB1I1O43294 461 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 PARNO95453 639 aaKnown RBP15.47■□□□□ 0.07
CCDC130-208ENST00000588071 GHRP10912 638 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 AXLP30530 894 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 CYP2C18P33260 490 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 ZNF165P49910 485 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 CCL23P55773 120 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 SNRPFP62306 86 aaKnown RBP15.47■□□□□ 0.07
CCDC130-208ENST00000588071 PAK2Q13177 524 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 ATF7IP2Q5U623 682 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 ANKRD40Q6AI12 368 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 SLFN12LQ6IEE8 588 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 CENPPQ6IPU0 288 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 TRAF7Q6Q0C0 670 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 FAM228AQ86W67 206 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 GOLGA5Q8TBA6 731 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 CPB2Q96IY4 423 aa15.47■□□□□ 0.07
CCDC130-208ENST00000588071 ACO2Q99798 780 aaKnown RBP15.47■□□□□ 0.07
CCDC130-208ENST00000588071 CGNQ9P2M7 1197 aaKnown RBP15.47■□□□□ 0.07
CCDC130-208ENST00000588071 SCN5AQ14524 2016 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 UMODL1Q5DID0 1318 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 SMTNL1A8MU46 457 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 BECN2A8MW95 431 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 ANKRD63C9JTQ0 380 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 KIAA0355O15063 1070 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 CLIC2O15247 247 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 B4GALT5O43286 388 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 TSPAN1O60635 241 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 TIMP1P01033 207 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 RAG1P15918 1043 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 ARF4P18085 180 aaPredicted RBP15.46■□□□□ 0.07
CCDC130-208ENST00000588071 RPL13P26373 211 aaKnown RBP15.46■□□□□ 0.07
CCDC130-208ENST00000588071 CD52P31358 61 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 LRRC63Q05C16 580 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 LPIN1Q14693 890 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 ZPBP2Q6X784 338 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 TSHZ1Q6ZSZ6 1077 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 APBB1IPQ7Z5R6 666 aaPredicted RBP15.46■□□□□ 0.07
CCDC130-208ENST00000588071 POMGNT1Q8WZA1 660 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 DPF3Q92784 378 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 IKZF4Q9H2S9 585 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 AGO3Q9H9G7 860 aaKnown RBP15.46■□□□□ 0.07
CCDC130-208ENST00000588071 PADI3Q9ULW8 664 aa15.46■□□□□ 0.07
CCDC130-208ENST00000588071 CNTNAP2Q9UHC6 1331 aa15.45■□□□□ 0.06
CCDC130-208ENST00000588071 TRIM43BA6NCK2 446 aa15.45■□□□□ 0.06
CCDC130-208ENST00000588071 N4BP3O15049 544 aa15.45■□□□□ 0.06
CCDC130-208ENST00000588071 CLDN3O15551 220 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms