RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 MCM7P33993 719 aa15.98■□□□□ 0.15
VMP1-206ENST00000587945 SLC11A1P49279 550 aa15.98■□□□□ 0.15
VMP1-206ENST00000587945 MRPL10Q7Z7H8 261 aaKnown RBP15.98■□□□□ 0.15
VMP1-206ENST00000587945 ASAP3Q8TDY4 903 aa15.98■□□□□ 0.15
VMP1-206ENST00000587945 IGSF21Q96ID5 467 aa15.98■□□□□ 0.15
VMP1-206ENST00000587945 CPB2Q96IY4 423 aa15.98■□□□□ 0.15
VMP1-206ENST00000587945 ZBP1Q9H171 429 aa15.98■□□□□ 0.15
VMP1-206ENST00000587945 HCFC2Q9Y5Z7 792 aa15.98■□□□□ 0.15
VMP1-206ENST00000587945 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.97■□□□□ 0.15
VMP1-206ENST00000587945 POTEMA6NI47 508 aa15.97■□□□□ 0.15
VMP1-206ENST00000587945 TSPAN1O60635 241 aa15.97■□□□□ 0.15
VMP1-206ENST00000587945 DDHD2O94830 711 aa15.97■□□□□ 0.15
VMP1-206ENST00000587945 LYPLA2O95372 231 aa15.97■□□□□ 0.15
VMP1-206ENST00000587945 SP100P23497 879 aaPredicted RBP15.97■□□□□ 0.15
VMP1-206ENST00000587945 PTENP60484 403 aa15.97■□□□□ 0.15
VMP1-206ENST00000587945 CBX2Q14781 532 aaPredicted RBP15.97■□□□□ 0.15
VMP1-206ENST00000587945 HFE2Q6ZVN8 426 aa15.97■□□□□ 0.15
VMP1-206ENST00000587945 DDX53Q86TM3 631 aaKnown RBP15.97■□□□□ 0.15
VMP1-206ENST00000587945 SMG8Q8ND04 991 aaKnown RBP15.97■□□□□ 0.15
VMP1-206ENST00000587945 URGCPQ8TCY9 931 aa15.97■□□□□ 0.15
VMP1-206ENST00000587945 CASP10Q92851 521 aa15.97■□□□□ 0.15
VMP1-206ENST00000587945 VN1R3Q9BXE9 311 aa15.97■□□□□ 0.15
VMP1-206ENST00000587945 EIF2AQ9BY44 585 aaKnown RBP15.97■□□□□ 0.15
VMP1-206ENST00000587945 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
VMP1-206ENST00000587945 RSAD1Q9HA92 442 aa15.97■□□□□ 0.15
VMP1-206ENST00000587945 ANKEF1Q9NU02 776 aa15.97■□□□□ 0.15
VMP1-206ENST00000587945 LIMCH1Q9UPQ0 1083 aa15.97■□□□□ 0.15
VMP1-206ENST00000587945 WDR81Q562E7 1941 aa15.96■□□□□ 0.15
VMP1-206ENST00000587945 INO80B-WBP1J3KQ70 363 aa15.96■□□□□ 0.15
VMP1-206ENST00000587945 EIF5BO60841 1220 aaKnown RBP15.96■□□□□ 0.15
VMP1-206ENST00000587945 ERLIN2O94905 339 aa15.96■□□□□ 0.15
VMP1-206ENST00000587945 POMCP01189 267 aa15.96■□□□□ 0.15
VMP1-206ENST00000587945 HOXB8P17481 243 aaPredicted RBP15.96■□□□□ 0.15
VMP1-206ENST00000587945 ARL2P36404 184 aa15.96■□□□□ 0.15
VMP1-206ENST00000587945 RARRES1P49788 294 aa15.96■□□□□ 0.15
VMP1-206ENST00000587945 CAPSQ13938 189 aa15.96■□□□□ 0.15
VMP1-206ENST00000587945 MXD4Q14582 209 aaPredicted RBP15.96■□□□□ 0.15
VMP1-206ENST00000587945 KANK3Q6NY19 840 aa15.96■□□□□ 0.15
VMP1-206ENST00000587945 MAEAQ7L5Y9 396 aa15.96■□□□□ 0.15
VMP1-206ENST00000587945 C12orf76Q8N812 135 aaPredicted RBP15.96■□□□□ 0.15
VMP1-206ENST00000587945 RSPH1Q8WYR4 309 aa15.96■□□□□ 0.15
VMP1-206ENST00000587945 EDAQ92838 391 aa15.96■□□□□ 0.15
VMP1-206ENST00000587945 ARIH1Q9Y4X5 557 aaPredicted RBP15.96■□□□□ 0.15
VMP1-206ENST00000587945 HES2Q9Y543 173 aa15.96■□□□□ 0.15
VMP1-206ENST00000587945 USO1O60763 962 aaKnown RBP15.95■□□□□ 0.14
VMP1-206ENST00000587945 DGAT1O75907 488 aa15.95■□□□□ 0.14
VMP1-206ENST00000587945 WEE2P0C1S8 567 aa15.95■□□□□ 0.14
VMP1-206ENST00000587945 SPATA31C1P0DKV0 1188 aa15.95■□□□□ 0.14
VMP1-206ENST00000587945 CTSAP10619 480 aa15.95■□□□□ 0.14
VMP1-206ENST00000587945 NCLP19338 710 aaKnown RBP15.95■□□□□ 0.14
VMP1-206ENST00000587945 GLRA2P23416 452 aa15.95■□□□□ 0.14
VMP1-206ENST00000587945 MBTD1Q05BQ5 628 aa15.95■□□□□ 0.14
VMP1-206ENST00000587945 TFDP1Q14186 410 aa15.95■□□□□ 0.14
VMP1-206ENST00000587945 BMS1Q14692 1282 aaKnown RBP15.95■□□□□ 0.14
VMP1-206ENST00000587945 SAFBQ15424 915 aaKnown RBP eCLIP15.95■□□□□ 0.14
VMP1-206ENST00000587945 ZNF174Q15697 407 aa15.95■□□□□ 0.14
VMP1-206ENST00000587945 AMHR2Q16671 573 aa15.95■□□□□ 0.14
VMP1-206ENST00000587945 TMEM87AQ8NBN3 555 aa15.95■□□□□ 0.14
VMP1-206ENST00000587945 C8orf76Q96K31 380 aa15.95■□□□□ 0.14
VMP1-206ENST00000587945 CCDC43Q96MW1 224 aaKnown RBP15.95■□□□□ 0.14
VMP1-206ENST00000587945 POLR3FQ9H1D9 316 aaPredicted RBP15.95■□□□□ 0.14
VMP1-206ENST00000587945 GPRC5CQ9NQ84 441 aa15.95■□□□□ 0.14
VMP1-206ENST00000587945 IPPQ9Y573 584 aa15.95■□□□□ 0.14
VMP1-206ENST00000587945 CNTNAP2Q9UHC6 1331 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 MED24O75448 989 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 ALDH2P05091 517 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 SSBP05455 408 aaKnown RBP eCLIP15.94■□□□□ 0.14
VMP1-206ENST00000587945 ITGA4P13612 1032 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 EPCAMP16422 314 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 ZXDAP98168 799 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 TPRNQ4KMQ1 711 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 RARS2Q5T160 578 aaKnown RBP15.94■□□□□ 0.14
VMP1-206ENST00000587945 NOTUMQ6P988 496 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 CDR2LQ86X02 465 aaPredicted RBP15.94■□□□□ 0.14
VMP1-206ENST00000587945 CATSPER3Q86XQ3 398 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 IFNLR1Q8IU57 520 aaPredicted RBP15.94■□□□□ 0.14
VMP1-206ENST00000587945 FEZF2Q8TBJ5 459 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 FAM193BQ96PV7 902 aaPredicted RBP15.94■□□□□ 0.14
VMP1-206ENST00000587945 GAD1Q99259 594 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 APOL6Q9BWW8 343 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 ADAM7Q9H2U9 754 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 POMKQ9H5K3 350 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 TSHZ2Q9NRE2 1034 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 KANSL3Q9P2N6 904 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 FAN1Q9Y2M0 1017 aa15.94■□□□□ 0.14
VMP1-206ENST00000587945 NRP1O14786 923 aa15.93■□□□□ 0.14
VMP1-206ENST00000587945 B4GALT5O43286 388 aa15.93■□□□□ 0.14
VMP1-206ENST00000587945 ARF4P18085 180 aaPredicted RBP15.93■□□□□ 0.14
VMP1-206ENST00000587945 AXLP30530 894 aa15.93■□□□□ 0.14
VMP1-206ENST00000587945 MLH1P40692 756 aa15.93■□□□□ 0.14
VMP1-206ENST00000587945 NCBP1Q09161 790 aaKnown RBP15.93■□□□□ 0.14
VMP1-206ENST00000587945 PTPN14Q15678 1187 aa15.93■□□□□ 0.14
VMP1-206ENST00000587945 TRIM67Q6ZTA4 783 aa15.93■□□□□ 0.14
VMP1-206ENST00000587945 SLC22A17Q8WUG5 538 aa15.93■□□□□ 0.14
VMP1-206ENST00000587945 KIF2CQ99661 725 aa15.93■□□□□ 0.14
VMP1-206ENST00000587945 TMEM175Q9BSA9 504 aa15.93■□□□□ 0.14
VMP1-206ENST00000587945 CSRNP2Q9H175 543 aa15.93■□□□□ 0.14
VMP1-206ENST00000587945 MIOSQ9NXC5 875 aa15.93■□□□□ 0.14
VMP1-206ENST00000587945 PRG3Q9Y2Y8 225 aaPredicted RBP15.93■□□□□ 0.14
VMP1-206ENST00000587945 IRAK3Q9Y616 596 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms