RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 IFT122Q9HBG6 1241 aa16.95■□□□□ 0.3
HDAC5-206ENST00000587776 FAN1Q9Y2M0 1017 aa16.95■□□□□ 0.3
HDAC5-206ENST00000587776 CNTNAP2Q9UHC6 1331 aa16.95■□□□□ 0.3
HDAC5-206ENST00000587776 M0R2N6 131 aa16.94■□□□□ 0.3
HDAC5-206ENST00000587776 EML1O00423 815 aa16.94■□□□□ 0.3
HDAC5-206ENST00000587776 ERLIN2O94905 339 aa16.94■□□□□ 0.3
HDAC5-206ENST00000587776 PPP2R5CQ13362 524 aa16.94■□□□□ 0.3
HDAC5-206ENST00000587776 ASTLQ6HA08 431 aaPredicted RBP16.94■□□□□ 0.3
HDAC5-206ENST00000587776 AGMOQ6ZNB7 445 aa16.94■□□□□ 0.3
HDAC5-206ENST00000587776 SRGAP1Q7Z6B7 1085 aa16.94■□□□□ 0.3
HDAC5-206ENST00000587776 FAM177A1Q8N128 213 aaPredicted RBP16.94■□□□□ 0.3
HDAC5-206ENST00000587776 TMEM105Q8N8V8 129 aa16.94■□□□□ 0.3
HDAC5-206ENST00000587776 TMEM143Q96AN5 459 aa16.94■□□□□ 0.3
HDAC5-206ENST00000587776 ZNF274Q96GC6 653 aaPredicted RBP16.94■□□□□ 0.3
HDAC5-206ENST00000587776 MRPL17Q9NRX2 175 aaKnown RBP16.94■□□□□ 0.3
HDAC5-206ENST00000587776 KANSL3Q9P2N6 904 aa16.94■□□□□ 0.3
HDAC5-206ENST00000587776 KCNJ14Q9UNX9 436 aa16.94■□□□□ 0.3
HDAC5-206ENST00000587776 MTCL1Q9Y4B5 1905 aaKnown RBP16.94■□□□□ 0.3
HDAC5-206ENST00000587776 C2CD2LO14523 706 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 B4GALT3O60512 393 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 POMCP01189 267 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 ALDH2P05091 517 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 URODP06132 367 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 P4HBP07237 508 aaKnown RBP16.93■□□□□ 0.3
HDAC5-206ENST00000587776 XBP1P17861 261 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 RFC5P40937 340 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 CLCN4P51793 760 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 LAMTOR4Q0VGL1 99 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 NCAPH2Q6IBW4 605 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 OTOP3Q7RTS5 596 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 NEK8Q86SG6 692 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 FLCNQ8NFG4 579 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 TCP11Q8WWU5 503 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 PRPF31Q8WWY3 499 aaKnown RBP16.93■□□□□ 0.3
HDAC5-206ENST00000587776 FAM20AQ96MK3 541 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 KLHL5Q96PQ7 755 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 TMEM175Q9BSA9 504 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 VN1R3Q9BXE9 311 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 ZSWIM6Q9HCJ5 1215 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 VAV3Q9UKW4 847 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 PPME1Q9Y570 386 aa16.93■□□□□ 0.3
HDAC5-206ENST00000587776 GAS2O43903 313 aaKnown RBP16.92■□□□□ 0.3
HDAC5-206ENST00000587776 CCNT1O60563 726 aaKnown RBP16.92■□□□□ 0.3
HDAC5-206ENST00000587776 CDKL5O76039 1030 aa16.92■□□□□ 0.3
HDAC5-206ENST00000587776 DDHD2O94830 711 aa16.92■□□□□ 0.3
HDAC5-206ENST00000587776 CNPP09543 421 aaKnown RBP16.92■□□□□ 0.3
HDAC5-206ENST00000587776 GCFC2P16383 781 aaKnown RBP16.92■□□□□ 0.3
HDAC5-206ENST00000587776 AK2P54819 239 aa16.92■□□□□ 0.3
HDAC5-206ENST00000587776 EMC2Q15006 297 aa16.92■□□□□ 0.3
HDAC5-206ENST00000587776 NPY5RQ15761 445 aa16.92■□□□□ 0.3
HDAC5-206ENST00000587776 ELMSAN1Q6PJG2 1045 aa16.92■□□□□ 0.3
HDAC5-206ENST00000587776 OTUD6AQ7L8S5 288 aa16.92■□□□□ 0.3
HDAC5-206ENST00000587776 GPR149Q86SP6 731 aa16.92■□□□□ 0.3
HDAC5-206ENST00000587776 ZNF579Q8NAF0 562 aaKnown RBP16.92■□□□□ 0.3
HDAC5-206ENST00000587776 RNF149Q8NC42 400 aa16.92■□□□□ 0.3
HDAC5-206ENST00000587776 LXNQ9BS40 222 aa16.92■□□□□ 0.3
HDAC5-206ENST00000587776 DHX33Q9H6R0 707 aaKnown RBP16.92■□□□□ 0.3
HDAC5-206ENST00000587776 MINDY3Q9H8M7 445 aa16.92■□□□□ 0.3
HDAC5-206ENST00000587776 FBXL21Q9UKT6 434 aa16.92■□□□□ 0.3
HDAC5-206ENST00000587776 PRG3Q9Y2Y8 225 aaPredicted RBP16.92■□□□□ 0.3
HDAC5-206ENST00000587776 CACNA1HO95180 2353 aa16.92■□□□□ 0.3
HDAC5-206ENST00000587776 NRP1O14786 923 aa16.91■□□□□ 0.3
HDAC5-206ENST00000587776 ITGA4P13612 1032 aa16.91■□□□□ 0.3
HDAC5-206ENST00000587776 YWHABP31946 246 aaKnown RBP16.91■□□□□ 0.3
HDAC5-206ENST00000587776 OR1G1P47890 313 aa16.91■□□□□ 0.3
HDAC5-206ENST00000587776 AFF1P51825 1210 aaKnown RBP16.91■□□□□ 0.3
HDAC5-206ENST00000587776 XKR9Q5GH70 373 aa16.91■□□□□ 0.3
HDAC5-206ENST00000587776 MRPL10Q7Z7H8 261 aaKnown RBP16.91■□□□□ 0.3
HDAC5-206ENST00000587776 CNNM3Q8NE01 707 aa16.91■□□□□ 0.3
HDAC5-206ENST00000587776 FEZF2Q8TBJ5 459 aa16.91■□□□□ 0.3
HDAC5-206ENST00000587776 MTRQ99707 1265 aa16.91■□□□□ 0.3
HDAC5-206ENST00000587776 NAP1L4Q99733 375 aaKnown RBP16.91■□□□□ 0.3
HDAC5-206ENST00000587776 KCNMB3Q9NPA1 279 aa16.91■□□□□ 0.3
HDAC5-206ENST00000587776 UBN1Q9NPG3 1134 aa16.91■□□□□ 0.3
HDAC5-206ENST00000587776 MAN1C1Q9NR34 630 aa16.91■□□□□ 0.3
HDAC5-206ENST00000587776 WRAP73Q9P2S5 460 aaPredicted RBP16.91■□□□□ 0.3
HDAC5-206ENST00000587776 SSX2IPQ9Y2D8 614 aa16.91■□□□□ 0.3
HDAC5-206ENST00000587776 ASAP2O43150 1006 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 BAG4O95429 457 aaKnown RBP16.9■□□□□ 0.3
HDAC5-206ENST00000587776 SOD2P04179 222 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 ADH1AP07327 375 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 NCLP19338 710 aaKnown RBP16.9■□□□□ 0.3
HDAC5-206ENST00000587776 CYP4A11Q02928 519 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 NCBP1Q09161 790 aaKnown RBP16.9■□□□□ 0.3
HDAC5-206ENST00000587776 TDGQ13569 410 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 UBXN11Q5T124 520 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 PPP4R3AQ6IN85 833 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 C15orf39Q6ZRI6 1047 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 PIK3AP1Q6ZUJ8 805 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 FERMT3Q86UX7 667 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 C4orf19Q8IY42 314 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 CCDC43Q96MW1 224 aaKnown RBP16.9■□□□□ 0.3
HDAC5-206ENST00000587776 PHF20Q9BVI0 1012 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 HERC2P3Q9BVR0 1158 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 PDRG1Q9NUG6 133 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 DPP7Q9UHL4 492 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 USP34Q70CQ2 3546 aa16.9■□□□□ 0.3
HDAC5-206ENST00000587776 TBX3O15119 743 aa16.89■□□□□ 0.29
HDAC5-206ENST00000587776 NR1I2O75469 434 aa16.89■□□□□ 0.29
HDAC5-206ENST00000587776 RFX1P22670 979 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms