RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 ZNF623O75123 536 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 ITGB1P05556 798 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 PRKCBP05771 671 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 PLA2G4BP0C869 781 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 PDIA4P13667 645 aaKnown RBP16.37■□□□□ 0.21
ATG4D-207ENST00000587256 TXLNAP40222 546 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 RAD51AP2Q09MP3 1159 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 DMP1Q13316 513 aaPredicted RBP16.37■□□□□ 0.21
ATG4D-207ENST00000587256 KARSQ15046 597 aaKnown RBP16.37■□□□□ 0.21
ATG4D-207ENST00000587256 MAPK6Q16659 721 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 RINT1Q6NUQ1 792 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 PPP4R3CPQ6ZMV5 832 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 CNNM3Q8NE01 707 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 URGCPQ8TCY9 931 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 ZNF558Q96NG5 402 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 TIPINQ9BVW5 301 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 EIF2AQ9BY44 585 aaKnown RBP16.37■□□□□ 0.21
ATG4D-207ENST00000587256 CSRNP2Q9H175 543 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 CWH43Q9H720 699 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 RSAD1Q9HA92 442 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 FBXO2Q9UK22 296 aaPredicted RBP16.37■□□□□ 0.21
ATG4D-207ENST00000587256 PLAGL2Q9UPG8 496 aa16.37■□□□□ 0.21
ATG4D-207ENST00000587256 CCDC169A6NNP5 214 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 NPTXRO95502 500 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 ITGA4P13612 1032 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 PLCG1P19174 1290 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 NCLP19338 710 aaKnown RBP16.36■□□□□ 0.21
ATG4D-207ENST00000587256 GUCY2CP25092 1073 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 PPM1AP35813 382 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 EFNA5P52803 228 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 PEX3P56589 373 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 RNASELQ05823 741 aaKnown RBP16.36■□□□□ 0.21
ATG4D-207ENST00000587256 PRPF4BQ13523 1007 aaKnown RBP16.36■□□□□ 0.21
ATG4D-207ENST00000587256 STK38Q15208 465 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 NOMO2Q5JPE7 1267 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 SLC27A1Q6PCB7 646 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 LRRC55Q6ZSA7 311 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 C1orf186Q6ZWK4 172 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 CDR2LQ86X02 465 aaPredicted RBP16.36■□□□□ 0.21
ATG4D-207ENST00000587256 HACE1Q8IYU2 909 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 SYT2Q8N9I0 419 aaPredicted RBP16.36■□□□□ 0.21
ATG4D-207ENST00000587256 ZNF396Q96N95 335 aaPredicted RBP16.36■□□□□ 0.21
ATG4D-207ENST00000587256 APOL6Q9BWW8 343 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 NSUN3Q9H649 340 aaKnown RBP16.36■□□□□ 0.21
ATG4D-207ENST00000587256 IPPQ9Y573 584 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 MYH15Q9Y2K3 1946 aa16.36■□□□□ 0.21
ATG4D-207ENST00000587256 ZC3H11AO75152 810 aaKnown RBP eCLIP16.35■□□□□ 0.21
ATG4D-207ENST00000587256 FGF18O76093 207 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 F13A1P00488 732 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 ZSCAN22P10073 491 aaPredicted RBP16.35■□□□□ 0.21
ATG4D-207ENST00000587256 PBX3P40426 434 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 SLC12A3P55017 1021 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 DHX8Q14562 1220 aaKnown RBP16.35■□□□□ 0.21
ATG4D-207ENST00000587256 SPECC1Q5M775 1068 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 KCNT2Q6UVM3 1135 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 MRPL10Q7Z7H8 261 aaKnown RBP16.35■□□□□ 0.21
ATG4D-207ENST00000587256 GPBP1Q86WP2 473 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 DAW1Q8N136 415 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 KRI1Q8N9T8 703 aaKnown RBP16.35■□□□□ 0.21
ATG4D-207ENST00000587256 SMG8Q8ND04 991 aaKnown RBP16.35■□□□□ 0.21
ATG4D-207ENST00000587256 POF1BQ8WVV4 589 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 CLIC6Q96NY7 704 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 CCDC113Q9H0I3 377 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 GBP3Q9H0R5 595 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 FZD8Q9H461 694 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 NXF3Q9H4D5 531 aaKnown RBP16.35■□□□□ 0.21
ATG4D-207ENST00000587256 TBC1D13Q9NVG8 400 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 KCND2Q9NZV8 630 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 SRPRBQ9Y5M8 271 aaKnown RBP16.35■□□□□ 0.21
ATG4D-207ENST00000587256 PRUNE2Q8WUY3 3088 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 PHLPP2Q6ZVD8 1323 aa16.35■□□□□ 0.21
ATG4D-207ENST00000587256 A0A1B0GUA9 196 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 N4BP3O15049 544 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 OFD1O75665 1012 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 KRT18P05783 430 aaKnown RBP16.34■□□□□ 0.21
ATG4D-207ENST00000587256 NPTX2P47972 431 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 NASPP49321 788 aaPredicted RBP16.34■□□□□ 0.21
ATG4D-207ENST00000587256 CACNB1Q02641 598 aaPredicted RBP16.34■□□□□ 0.21
ATG4D-207ENST00000587256 MAPK7Q13164 816 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 SLC39A14Q15043 492 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 FAM187BQ17R55 369 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 FOXD4L6Q3SYB3 417 aaPredicted RBP16.34■□□□□ 0.21
ATG4D-207ENST00000587256 TCEAL5Q5H9L2 206 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 FOXD4L3Q6VB84 417 aaPredicted RBP16.34■□□□□ 0.21
ATG4D-207ENST00000587256 AGMOQ6ZNB7 445 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 SPPL3Q8TCT6 385 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 RAD54LQ92698 747 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 SYMPKQ92797 1274 aaKnown RBP16.34■□□□□ 0.21
ATG4D-207ENST00000587256 EPSTI1Q96J88 318 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 ADPGKQ9BRR6 497 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 CCSER1Q9C0I3 900 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 PDZD7Q9H5P4 517 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 UBN1Q9NPG3 1134 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 KMT5AQ9NQR1 393 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 CCDC39Q9UFE4 941 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 HES2Q9Y543 173 aa16.34■□□□□ 0.21
ATG4D-207ENST00000587256 ACKR2O00590 384 aa16.33■□□□□ 0.2
ATG4D-207ENST00000587256 DNAJB1P25685 340 aa16.33■□□□□ 0.2
ATG4D-207ENST00000587256 MLH1P40692 756 aa16.33■□□□□ 0.2
ATG4D-207ENST00000587256 ALDH7A1P49419 539 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms