RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 PPP1R13LQ8WUF5 828 aa16.17■□□□□ 0.18
CALR-204ENST00000586967 KIFC3Q9BVG8 833 aa16.17■□□□□ 0.18
CALR-204ENST00000586967 TRPV6Q9H1D0 765 aa16.17■□□□□ 0.18
CALR-204ENST00000586967 IFT122Q9HBG6 1241 aa16.17■□□□□ 0.18
CALR-204ENST00000586967 TRAF3IP3Q9Y228 551 aa16.17■□□□□ 0.18
CALR-204ENST00000586967 GINS2Q9Y248 185 aa16.17■□□□□ 0.18
CALR-204ENST00000586967 SIP14410 1827 aa16.17■□□□□ 0.18
CALR-204ENST00000586967 PQBP1O60828 265 aaKnown RBP16.16■□□□□ 0.18
CALR-204ENST00000586967 PIGRP01833 764 aa16.16■□□□□ 0.18
CALR-204ENST00000586967 DARSP14868 501 aaKnown RBP16.16■□□□□ 0.18
CALR-204ENST00000586967 CD44P16070 742 aaKnown RBP16.16■□□□□ 0.18
CALR-204ENST00000586967 ATN1P54259 1190 aaPredicted RBP16.16■□□□□ 0.18
CALR-204ENST00000586967 PRPF4BQ13523 1007 aaKnown RBP16.16■□□□□ 0.18
CALR-204ENST00000586967 NFIL3Q16649 462 aa16.16■□□□□ 0.18
CALR-204ENST00000586967 FAM26DQ5JW98 314 aa16.16■□□□□ 0.18
CALR-204ENST00000586967 FAM114A1Q8IWE2 563 aa16.16■□□□□ 0.18
CALR-204ENST00000586967 CCDC113Q9H0I3 377 aa16.16■□□□□ 0.18
CALR-204ENST00000586967 FZD8Q9H461 694 aa16.16■□□□□ 0.18
CALR-204ENST00000586967 CDY2AQ9Y6F7 541 aa16.16■□□□□ 0.18
CALR-204ENST00000586967 ADGRA3Q8IWK6 1321 aa16.16■□□□□ 0.18
CALR-204ENST00000586967 GPR182O15218 404 aa16.15■□□□□ 0.18
CALR-204ENST00000586967 FKBP3Q00688 224 aaKnown RBP16.15■□□□□ 0.18
CALR-204ENST00000586967 MBTD1Q05BQ5 628 aa16.15■□□□□ 0.18
CALR-204ENST00000586967 TMEM62Q0P6H9 643 aa16.15■□□□□ 0.18
CALR-204ENST00000586967 SPATA1Q5VX52 437 aa16.15■□□□□ 0.18
CALR-204ENST00000586967 CATSPER4Q7RTX7 472 aa16.15■□□□□ 0.18
CALR-204ENST00000586967 GLIS3Q8NEA6 775 aa16.15■□□□□ 0.18
CALR-204ENST00000586967 ANKRD20A12PQ8NF67 263 aa16.15■□□□□ 0.18
CALR-204ENST00000586967 DIS3LQ8TF46 1054 aaKnown RBP16.15■□□□□ 0.18
CALR-204ENST00000586967 TMEM174Q8WUU8 243 aa16.15■□□□□ 0.18
CALR-204ENST00000586967 OSMRQ99650 979 aa16.15■□□□□ 0.18
CALR-204ENST00000586967 FGFBP2Q9BYJ0 223 aa16.15■□□□□ 0.18
CALR-204ENST00000586967 KCTD10Q9H3F6 313 aa16.15■□□□□ 0.18
CALR-204ENST00000586967 CNTNAP2Q9UHC6 1331 aa16.15■□□□□ 0.18
CALR-204ENST00000586967 N4BP3O15049 544 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 CETN3O15182 167 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 GNA14O95837 355 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 CKBP12277 381 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 SELPP16109 830 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 GARTP22102 1010 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 TLE2Q04725 743 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 MGAT3Q09327 533 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 KYAT1Q16773 422 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 TRIM71Q2Q1W2 868 aaKnown RBP16.14■□□□□ 0.17
CALR-204ENST00000586967 TRIM60Q495X7 471 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 ARMCX5Q6P1M9 558 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 C12orf56Q8IXR9 622 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 CSGALNACT2Q8N6G5 542 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 CCDC51Q96ER9 411 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 CEP63Q96MT8 703 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 CTAGE1Q96RT6 745 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 PPP1R16BQ96T49 567 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 ADPGKQ9BRR6 497 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 KIAA1586Q9HCI6 787 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 ATP11BQ9Y2G3 1177 aa16.14■□□□□ 0.17
CALR-204ENST00000586967 RPS6KA5O75582 802 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 TOM1L1O75674 476 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 LDHAP00338 332 aaKnown RBP16.13■□□□□ 0.17
CALR-204ENST00000586967 CLTBP09497 229 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 CTSHP09668 335 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 MATR3P43243 847 aaKnown RBP eCLIP16.13■□□□□ 0.17
CALR-204ENST00000586967 SPAG1Q07617 926 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 ATF7IP2Q5U623 682 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 ANKRD40Q6AI12 368 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 TTI2Q6NXR4 508 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 NOTUMQ6P988 496 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 TSHZ1Q6ZSZ6 1077 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 SLC9A9Q8IVB4 645 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 AOPEPQ8N6M6 819 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 DHX38Q92620 1227 aaKnown RBP16.13■□□□□ 0.17
CALR-204ENST00000586967 TCHPQ9BT92 498 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 SEMA6BQ9H3T3 888 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 THAP9Q9H5L6 903 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 CBX8Q9HC52 389 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 CHST12Q9NRB3 414 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 AGPAT3Q9NRZ7 376 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 MAGEC2Q9UBF1 373 aaPredicted RBP16.13■□□□□ 0.17
CALR-204ENST00000586967 TNFSF13BQ9Y275 285 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 FRMD4BQ9Y2L6 1034 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 NFE2L3Q9Y4A8 694 aa16.13■□□□□ 0.17
CALR-204ENST00000586967 CENPFP49454 3210 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 CLDN3O15551 220 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 CHRNA1P02708 482 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 NR3C1P04150 777 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 TPM2P07951 284 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 PRKCSHP14314 528 aaPredicted RBP16.12■□□□□ 0.17
CALR-204ENST00000586967 EN2P19622 333 aaPredicted RBP16.12■□□□□ 0.17
CALR-204ENST00000586967 NR2F2P24468 414 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 STX17P56962 302 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 ZCWPW2Q504Y3 356 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 ZNF618Q5T7W0 954 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 LRRC8DQ7L1W4 858 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 TAS1R3Q7RTX0 852 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 USP37Q86T82 979 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 POMGNT1Q8WZA1 660 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 ABHD8Q96I13 439 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 ZNF668Q96K58 619 aaPredicted RBP16.12■□□□□ 0.17
CALR-204ENST00000586967 ACO2Q99798 780 aaKnown RBP16.12■□□□□ 0.17
CALR-204ENST00000586967 HTATIP2Q9BUP3 242 aa16.12■□□□□ 0.17
CALR-204ENST00000586967 HIPK3Q9H422 1215 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms