RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 RNASELQ05823 741 aaKnown RBP13.33□□□□□ -0.28
BRCA1-225ENST00000586385 TDGQ13569 410 aa13.33□□□□□ -0.28
BRCA1-225ENST00000586385 BMS1Q14692 1282 aaKnown RBP13.33□□□□□ -0.28
BRCA1-225ENST00000586385 CCDC149Q6ZUS6 474 aa13.33□□□□□ -0.28
BRCA1-225ENST00000586385 PPFIBP1Q86W92 1011 aa13.33□□□□□ -0.28
BRCA1-225ENST00000586385 DAGLBQ8NCG7 672 aa13.33□□□□□ -0.28
BRCA1-225ENST00000586385 SMG8Q8ND04 991 aaKnown RBP13.33□□□□□ -0.28
BRCA1-225ENST00000586385 FLCNQ8NFG4 579 aa13.33□□□□□ -0.28
BRCA1-225ENST00000586385 RSAD2Q8WXG1 361 aa13.33□□□□□ -0.28
BRCA1-225ENST00000586385 TMEM143Q96AN5 459 aa13.33□□□□□ -0.28
BRCA1-225ENST00000586385 INO80BQ9C086 356 aaPredicted RBP13.33□□□□□ -0.28
BRCA1-225ENST00000586385 DHX33Q9H6R0 707 aaKnown RBP13.33□□□□□ -0.28
BRCA1-225ENST00000586385 RSAD1Q9HA92 442 aa13.33□□□□□ -0.28
BRCA1-225ENST00000586385 DUSP12Q9UNI6 340 aa13.33□□□□□ -0.28
BRCA1-225ENST00000586385 COL4A3BPQ9Y5P4 624 aa13.33□□□□□ -0.28
BRCA1-225ENST00000586385 NRP1O14786 923 aa13.32□□□□□ -0.28
BRCA1-225ENST00000586385 KLRC2P26717 231 aa13.32□□□□□ -0.28
BRCA1-225ENST00000586385 LETM2Q2VYF4 491 aa13.32□□□□□ -0.28
BRCA1-225ENST00000586385 MOXD1Q6UVY6 613 aa13.32□□□□□ -0.28
BRCA1-225ENST00000586385 C15orf39Q6ZRI6 1047 aa13.32□□□□□ -0.28
BRCA1-225ENST00000586385 OTOP3Q7RTS5 596 aa13.32□□□□□ -0.28
BRCA1-225ENST00000586385 CCDC105Q8IYK2 499 aa13.32□□□□□ -0.28
BRCA1-225ENST00000586385 BLIDQ8IZY5 108 aa13.32□□□□□ -0.28
BRCA1-225ENST00000586385 CMASQ8NFW8 434 aaPredicted RBP13.32□□□□□ -0.28
BRCA1-225ENST00000586385 PRPF31Q8WWY3 499 aaKnown RBP13.32□□□□□ -0.28
BRCA1-225ENST00000586385 LARP6Q9BRS8 491 aaKnown RBP13.32□□□□□ -0.28
BRCA1-225ENST00000586385 TMEM175Q9BSA9 504 aa13.32□□□□□ -0.28
BRCA1-225ENST00000586385 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
BRCA1-225ENST00000586385 MFSD1Q9H3U5 465 aa13.32□□□□□ -0.28
BRCA1-225ENST00000586385 KCNMB3Q9NPA1 279 aa13.32□□□□□ -0.28
BRCA1-225ENST00000586385 MIOSQ9NXC5 875 aa13.32□□□□□ -0.28
BRCA1-225ENST00000586385 DMDP11532 3685 aa13.32□□□□□ -0.28
BRCA1-225ENST00000586385 KRBA1A5PL33 1030 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 CARNS1A5YM72 827 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 ZBTB39O15060 712 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 INPPL1O15357 1258 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 TEX28O15482 410 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 PAPLNO95428 1278 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 POMCP01189 267 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 SOD2P04179 222 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 MYBP10242 640 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 DSC1Q08554 894 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 LAMTOR4Q0VGL1 99 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 PPP2R5CQ13362 524 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 INF2Q27J81 1249 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 KIAA0319Q5VV43 1072 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 COLGALT2Q8IYK4 626 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 SIX5Q8N196 739 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 TMEM87AQ8NBN3 555 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 HAS1Q92839 578 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 NKD2Q969F2 451 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-225ENST00000586385 ZNF707Q96C28 371 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-225ENST00000586385 ACSF2Q96CM8 615 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-225ENST00000586385 PGBD4Q96DM1 585 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 RPS6KC1Q96S38 1066 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 MYADMQ96S97 322 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 HERC2P3Q9BVR0 1158 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 EMILIN2Q9BXX0 1053 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 EIF2AQ9BY44 585 aaKnown RBP13.31□□□□□ -0.28
BRCA1-225ENST00000586385 MAN1C1Q9NR34 630 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 BMP2KQ9NSY1 1161 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-225ENST00000586385 DDX25Q9UHL0 483 aaKnown RBP13.31□□□□□ -0.28
BRCA1-225ENST00000586385 FAN1Q9Y2M0 1017 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 PRG3Q9Y2Y8 225 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-225ENST00000586385 DCHS1Q96JQ0 3298 aa13.31□□□□□ -0.28
BRCA1-225ENST00000586385 C2CD2LO14523 706 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 DTNBO60941 627 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 RFPL2O75678 378 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 ALDH2P05091 517 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 SRGAP2CP0DJJ0 459 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 NCLP19338 710 aaKnown RBP13.3□□□□□ -0.28
BRCA1-225ENST00000586385 QARSP47897 775 aaKnown RBP13.3□□□□□ -0.28
BRCA1-225ENST00000586385 ANGPT1Q15389 498 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 CENPQQ7L2Z9 268 aaPredicted RBP13.3□□□□□ -0.28
BRCA1-225ENST00000586385 SRGAP1Q7Z6B7 1085 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 ADSSL1Q8N142 457 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 DTWD2Q8NBA8 298 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 URGCPQ8TCY9 931 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 CEP170P1Q96L14 293 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 C22orf23Q9BZE7 217 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 RXFP1Q9HBX9 757 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 WDR6Q9NNW5 1121 aaKnown RBP13.3□□□□□ -0.28
BRCA1-225ENST00000586385 XPNPEP1Q9NQW7 623 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 MRPL17Q9NRX2 175 aaKnown RBP13.3□□□□□ -0.28
BRCA1-225ENST00000586385 KCNJ14Q9UNX9 436 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 HES2Q9Y543 173 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 C2orf16Q68DN1 1984 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 CNTNAP2Q9UHC6 1331 aa13.3□□□□□ -0.28
BRCA1-225ENST00000586385 CCDC195A0A1B0GUA6 201 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 DEXIO95424 95 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 AK2P54819 239 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 SSRP1Q08945 709 aaKnown RBP13.29□□□□□ -0.28
BRCA1-225ENST00000586385 SPIRE1Q08AE8 756 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 NONOQ15233 471 aaKnown RBP eCLIP13.29□□□□□ -0.28
BRCA1-225ENST00000586385 AMHR2Q16671 573 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 EARS2Q5JPH6 523 aaKnown RBP13.29□□□□□ -0.28
BRCA1-225ENST00000586385 FERMT3Q86UX7 667 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 GSTCDQ8NEC7 633 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 PSPC1Q8WXF1 523 aaKnown RBP13.29□□□□□ -0.28
BRCA1-225ENST00000586385 B3GALT6Q96L58 329 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms