RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 TTC28Q96AY4 2481 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 A0A087WWV3 80 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 A0A1B0GUA9 196 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 PP2D1A8MPX8 630 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 GRM6O15303 877 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 ITGB1P05556 798 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 SCP2P22307 547 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 GUCY2CP25092 1073 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 PLCB3Q01970 1234 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 KRT17Q04695 432 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 DMP1Q13316 513 aaPredicted RBP11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 AMHR2Q16671 573 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 NOMO2Q5JPE7 1267 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 SLC27A1Q6PCB7 646 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 MAEAQ7L5Y9 396 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 APBB1IPQ7Z5R6 666 aaPredicted RBP11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 CABP7Q86V35 215 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 THNSL1Q8IYQ7 743 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 SYT2Q8N9I0 419 aaPredicted RBP11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 SPPL3Q8TCT6 385 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 HELQQ8TDG4 1101 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 ASB2Q96Q27 587 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 TRIM6Q9C030 488 aaPredicted RBP11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 FZD8Q9H461 694 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 RSAD1Q9HA92 442 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 STK39Q9UEW8 545 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 PUF60Q9UHX1 559 aaKnown RBP11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 TDRD15B5MCY1 1934 aaKnown RBP11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 PRUNE2Q8WUY3 3088 aa11.5□□□□□ -0.57
SMARCA4-209ENST00000586122 E9PMD0 336 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 ACKR2O00590 384 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 N4BP3O15049 544 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 INPPL1O15357 1258 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 FGF18O76093 207 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 ITGA4P13612 1032 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 ARF4P18085 180 aaPredicted RBP11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 CDC25AP30304 524 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 TXLNAP40222 546 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 ALDH7A1P49419 539 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 PRPF4BQ13523 1007 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 BMS1Q14692 1282 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 COL19A1Q14993 1142 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 ZRSR1Q15695 479 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 TMEM119Q4V9L6 283 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 UBXN11Q5T124 520 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 RINT1Q6NUQ1 792 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 KCNT2Q6UVM3 1135 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 LRRC55Q6ZSA7 311 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 C1orf186Q6ZWK4 172 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 POF1BQ8WVV4 589 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 PNMA5Q96PV4 448 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 ADPGKQ9BRR6 497 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 CCSER1Q9C0I3 900 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 TLR9Q9NR96 1032 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 SPG21Q9NZD8 308 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 RBM19Q9Y4C8 960 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 IPPQ9Y573 584 aa11.49□□□□□ -0.57
SMARCA4-209ENST00000586122 H0YCG3 227 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 OFD1O75665 1012 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 PRKCBP05771 671 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 RNASELQ05823 741 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 PTPAQ15257 358 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 PUS10Q3MIT2 529 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 TCEAL5Q5H9L2 206 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 AGMOQ6ZNB7 445 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 RASSF8Q8NHQ8 419 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 BSNDQ8WZ55 320 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 MRPS27Q92552 414 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 LPPQ93052 612 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 PABPC5Q96DU9 382 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 TMEM169Q96HH4 297 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 ZNF396Q96N95 335 aaPredicted RBP11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 FAM193BQ96PV7 902 aaPredicted RBP11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 CDCA3Q99618 268 aaPredicted RBP11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 TMEM175Q9BSA9 504 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 RUSC1Q9BVN2 902 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 CCDC113Q9H0I3 377 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 TMEM134Q9H6X4 195 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 UBE2ZQ9H832 354 aaPredicted RBP11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 ALG13Q9NP73 1137 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 PRDM6Q9NQX0 595 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 TBC1D13Q9NVG8 400 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 CCDC39Q9UFE4 941 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 ODF2LQ9ULJ1 636 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 GIT1Q9Y2X7 761 aa11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 SRPRBQ9Y5M8 271 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-209ENST00000586122 EYSQ5T1H1 3165 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 K7ERI5 159 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 B4GALT5O43286 388 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 HIP1RO75146 1068 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 SSBP05455 408 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 PLA2G4BP0C869 781 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 ABCD1P33897 745 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 SMTNP53814 917 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 SLC12A3P55017 1021 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 BCAR1P56945 870 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 CAMK1Q14012 370 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 SLC39A14Q15043 492 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 TMEM132AQ24JP5 1023 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms