RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	IL9	P15248	144 aa		18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	NRIP1	P48552	1158 aa		18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	ERVFC1	P60507	584 aa		18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	DLX2	Q07687	328 aa	Predicted RBP	18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	PDIA5	Q14554	519 aa		18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	LONRF3	Q496Y0	759 aa		18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	CDCA2	Q69YH5	1023 aa	Predicted RBP	18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	PADI6	Q6TGC4	694 aa		18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	AGMO	Q6ZNB7	445 aa		18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	SNX29	Q8TEQ0	813 aa		18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	IGFLR1	Q9H665	355 aa		18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	RSAD1	Q9HA92	442 aa		18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	FAM50B	Q9Y247	325 aa		18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	INPP5F	Q9Y2H2	1132 aa		18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	STK24	Q9Y6E0	443 aa		18.3	■□□□□ 0.52
CIRBP-204	ENST00000585630	MYH15	Q9Y2K3	1946 aa		18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	LRRIQ4	A6NIV6	560 aa		18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	OFD1	O75665	1012 aa		18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	ARF4	P18085	180 aa	Predicted RBP	18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	CYP11B2	P19099	503 aa		18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	NCL	P19338	710 aa	Known RBP	18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	BCAR1	P56945	870 aa		18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	ATP2C1	P98194	919 aa	Predicted RBP	18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	ADAM15	Q13444	863 aa		18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	ECM1	Q16610	540 aa		18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	MAEA	Q7L5Y9	396 aa		18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	CNNM3	Q8NE01	707 aa		18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	URGCP	Q8TCY9	931 aa		18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	CPB2	Q96IY4	423 aa		18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	TCF25	Q9BQ70	676 aa		18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	ENTPD7	Q9NQZ7	604 aa		18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	PUF60	Q9UHX1	559 aa	Known RBP	18.29	■□□□□ 0.52
CIRBP-204	ENST00000585630	GLP2R	O95838	553 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	ALDH7A1	P49419	539 aa	Known RBP	18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	NDUFV1	P49821	464 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	KRT17	Q04695	432 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	NCBP1	Q09161	790 aa	Known RBP	18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	CUL4A	Q13619	759 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	IL17A	Q16552	155 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	DUSP6	Q16828	381 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	PLPP4	Q5VZY2	271 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	PPP4R3CP	Q6ZMV5	832 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	FAM178B	Q8IXR5	827 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	SMG8	Q8ND04	991 aa	Known RBP	18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	MICAL1	Q8TDZ2	1067 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	BSND	Q8WZ55	320 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	MSLNL	Q96KJ4	702 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	CDCA3	Q99618	268 aa	Predicted RBP	18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	EIF2A	Q9BY44	585 aa	Known RBP	18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	CSRNP2	Q9H175	543 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	BHMT2	Q9H2M3	363 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	NRDE2	Q9H7Z3	1164 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	TLE6	Q9H808	572 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	DDX19A	Q9NUU7	478 aa	Known RBP	18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	IPP	Q9Y573	584 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	ZMYM2	Q9UBW7	1377 aa		18.28	■□□□□ 0.52
CIRBP-204	ENST00000585630	PP2D1	A8MPX8	630 aa		18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	INPPL1	O15357	1258 aa		18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	B4GALT5	O43286	388 aa		18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	B4GALT3	O60512	393 aa		18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	NAMPT	P43490	491 aa		18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	RNASEL	Q05823	741 aa	Known RBP	18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	SMAD4	Q13485	552 aa	Known RBP	18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	DTHD1	Q6ZMT9	781 aa		18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	RBM23	Q86U06	439 aa	Known RBP	18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	TMEM173	Q86WV6	379 aa	Predicted RBP	18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	ZBTB8OS	Q8IWT0	167 aa		18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	TMEM169	Q96HH4	297 aa		18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	PRIMPOL	Q96LW4	560 aa		18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	C2orf40	Q9H1Z8	148 aa		18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	NGRN	Q9NPE2	291 aa	Known RBP	18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	PRMT7	Q9NVM4	692 aa	Predicted RBP	18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	CD207	Q9UJ71	328 aa		18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	KIAA1024	Q9UPX6	916 aa		18.27	■□□□□ 0.52
CIRBP-204	ENST00000585630	NT5C1B-RDH14	C9J2C7	533 aa		18.26	■□□□□ 0.51
CIRBP-204	ENST00000585630	MBTPS2	O43462	519 aa		18.26	■□□□□ 0.51
CIRBP-204	ENST00000585630	ITGA4	P13612	1032 aa		18.26	■□□□□ 0.51
CIRBP-204	ENST00000585630	PPP2R5A	Q15172	486 aa		18.26	■□□□□ 0.51
CIRBP-204	ENST00000585630	CLUL1	Q15846	466 aa		18.26	■□□□□ 0.51
CIRBP-204	ENST00000585630	FAM187B	Q17R55	369 aa		18.26	■□□□□ 0.51
CIRBP-204	ENST00000585630	KRT79	Q5XKE5	535 aa		18.26	■□□□□ 0.51
CIRBP-204	ENST00000585630	LARP1B	Q659C4	914 aa	Known RBP	18.26	■□□□□ 0.51
CIRBP-204	ENST00000585630	MMTAG2	Q9BU76	263 aa	Known RBP	18.26	■□□□□ 0.51
CIRBP-204	ENST00000585630	NXF3	Q9H4D5	531 aa	Known RBP	18.26	■□□□□ 0.51
CIRBP-204	ENST00000585630	UBN1	Q9NPG3	1134 aa		18.26	■□□□□ 0.51
CIRBP-204	ENST00000585630	CLEC1B	Q9P126	229 aa		18.26	■□□□□ 0.51
CIRBP-204	ENST00000585630	DNAJB4	Q9UDY4	337 aa		18.26	■□□□□ 0.51
CIRBP-204	ENST00000585630	BARX2	Q9UMQ3	279 aa	Predicted RBP	18.26	■□□□□ 0.51
CIRBP-204	ENST00000585630	GALT	P07902	379 aa		18.25	■□□□□ 0.51
CIRBP-204	ENST00000585630	MLH1	P40692	756 aa		18.25	■□□□□ 0.51
CIRBP-204	ENST00000585630	SLC11A1	P49279	550 aa		18.25	■□□□□ 0.51
CIRBP-204	ENST00000585630	AFF1	P51825	1210 aa	Known RBP	18.25	■□□□□ 0.51
CIRBP-204	ENST00000585630	SMC1A	Q14683	1233 aa	Known RBP	18.25	■□□□□ 0.51
CIRBP-204	ENST00000585630	SMAD2	Q15796	467 aa	Known RBP	18.25	■□□□□ 0.51
CIRBP-204	ENST00000585630	ARL6IP4	Q66PJ3	421 aa	Known RBP	18.25	■□□□□ 0.51
CIRBP-204	ENST00000585630	SLC27A1	Q6PCB7	646 aa		18.25	■□□□□ 0.51
CIRBP-204	ENST00000585630	TMC7	Q7Z402	723 aa		18.25	■□□□□ 0.51
CIRBP-204	ENST00000585630	ZNF280B	Q86YH2	543 aa		18.25	■□□□□ 0.51
CIRBP-204	ENST00000585630	HACE1	Q8IYU2	909 aa		18.25	■□□□□ 0.51
CIRBP-204	ENST00000585630	SMRP1	Q8NCR6	262 aa		18.25	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms