RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 ENPEPQ07075 957 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 KCNH2Q12809 1159 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 SHHQ15465 462 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 ZC2HC1CQ53FD0 456 aaPredicted RBP11.36□□□□□ -0.59
LIG3-203ENST00000585370 C9orf50Q5SZB4 431 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 E4F1Q66K89 784 aaPredicted RBP11.36□□□□□ -0.59
LIG3-203ENST00000585370 PLA2G4FQ68DD2 849 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 FAM109BQ6ICB4 259 aaPredicted RBP11.36□□□□□ -0.59
LIG3-203ENST00000585370 ARMCX2Q7L311 632 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 NEK11Q8NG66 645 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 SLC7A3Q8WY07 619 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
LIG3-203ENST00000585370 LENG1Q96BZ8 264 aaPredicted RBP11.36□□□□□ -0.59
LIG3-203ENST00000585370 EEF2KMTQ96G04 330 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 GPR20Q99678 358 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 TTYH3Q9C0H2 523 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 DHX33Q9H6R0 707 aaKnown RBP11.36□□□□□ -0.59
LIG3-203ENST00000585370 BCAS3Q9H6U6 928 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 POLD4Q9HCU8 107 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 PRDM5Q9NQX1 630 aaPredicted RBP11.36□□□□□ -0.59
LIG3-203ENST00000585370 AGPAT3Q9NRZ7 376 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 LCTP09848 1927 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 PLXNA1Q9UIW2 1896 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 EMSYQ7Z589 1322 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 LTBP2Q14767 1821 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 CCDC169A6NNP5 214 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 NKRFO15226 690 aaKnown RBP eCLIP11.35□□□□□ -0.59
LIG3-203ENST00000585370 CLIC2O15247 247 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 AKAP3O75969 853 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 SNAI1O95863 264 aaPredicted RBP11.35□□□□□ -0.59
LIG3-203ENST00000585370 GH1P01241 217 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 CCDC175P0C221 793 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 KRT13P13646 458 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 TCF7P36402 384 aaPredicted RBP11.35□□□□□ -0.59
LIG3-203ENST00000585370 NPTX2P47972 431 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 POLGP54098 1239 aaPredicted RBP11.35□□□□□ -0.59
LIG3-203ENST00000585370 MCCD1P59942 119 aaPredicted RBP11.35□□□□□ -0.59
LIG3-203ENST00000585370 TARBP2Q15633 366 aaKnown RBP11.35□□□□□ -0.59
LIG3-203ENST00000585370 MEA1Q16626 185 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 PTPN21Q16825 1174 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 LY6KQ17RY6 165 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 MTERF2Q49AM1 385 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 BRDTQ58F21 947 aaPredicted RBP11.35□□□□□ -0.59
LIG3-203ENST00000585370 CEP135Q66GS9 1140 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 MAEAQ7L5Y9 396 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 RNF180Q86T96 592 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 FAM186BQ8IYM0 893 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 CCDC170Q8IYT3 715 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 TMEM161BQ8NDZ6 487 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 TCP11Q8WWU5 503 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 SYN2Q92777 582 aaPredicted RBP11.35□□□□□ -0.59
LIG3-203ENST00000585370 EMID1Q96A84 441 aaPredicted RBP11.35□□□□□ -0.59
LIG3-203ENST00000585370 BORCS6Q96GS4 357 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 PRIMPOLQ96LW4 560 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 SPATA33Q96N06 139 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 GUCD1Q96NT3 240 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 MMRN2Q9H8L6 949 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 PLCB1Q9NQ66 1216 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 TBX20Q9UMR3 447 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 PAXBP1Q9Y5B6 917 aa11.35□□□□□ -0.59
LIG3-203ENST00000585370 ZMYM2Q9UBW7 1377 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 A0A1W2PQ45 241 aaPredicted RBP11.34□□□□□ -0.59
LIG3-203ENST00000585370 A0A1W2PQY0 241 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 SLC16A4O15374 487 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 P4HA2O15460 535 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 HBP1O60381 514 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 EXOC3O60645 756 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 N4BP1O75113 896 aaKnown RBP11.34□□□□□ -0.59
LIG3-203ENST00000585370 ADAMTS4O75173 837 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 MAFO75444 373 aaPredicted RBP11.34□□□□□ -0.59
LIG3-203ENST00000585370 TNNT1P13805 278 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 AKR1A1P14550 325 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 ATP4AP20648 1035 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 CYLC1P35663 651 aaPredicted RBP11.34□□□□□ -0.59
LIG3-203ENST00000585370 ARL2P36404 184 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 GOLGA8FQ08AF8 430 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 KCNA1Q09470 495 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 GOLGA8DPQ0D2H9 430 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 EMC2Q15006 297 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 IER5Q5VY09 327 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 IQSEC1Q6DN90 963 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 GBP6Q6ZN66 633 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 NYAP1Q6ZVC0 841 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 INTS8Q75QN2 995 aaKnown RBP11.34□□□□□ -0.59
LIG3-203ENST00000585370 EEPD1Q7L9B9 569 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 USP37Q86T82 979 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 FMNL3Q8IVF7 1028 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 MAP4K3Q8IVH8 894 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 C17orf53Q8N3J3 647 aaPredicted RBP11.34□□□□□ -0.59
LIG3-203ENST00000585370 XXYLT1Q8NBI6 393 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 KLHDC9Q8NEP7 349 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 ATP8B4Q8TF62 1192 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 GLG1Q92896 1179 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 VTI1AQ96AJ9 217 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 FAM161BQ96MY7 647 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 PCYT2Q99447 389 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 ABHD16BQ9H3Z7 469 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 TMEM134Q9H6X4 195 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 KIAA1586Q9HCI6 787 aa11.34□□□□□ -0.59
LIG3-203ENST00000585370 XPNPEP1Q9NQW7 623 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms