RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 TEX28O15482 410 aa20.39■□□□□ 0.85
TOP3A-220ENST00000585031 KINO60870 393 aaKnown RBP20.39■□□□□ 0.85
TOP3A-220ENST00000585031 EFEMP2O95967 443 aa20.39■□□□□ 0.85
TOP3A-220ENST00000585031 RFX1P22670 979 aa20.39■□□□□ 0.85
TOP3A-220ENST00000585031 CDC27P30260 824 aa20.39■□□□□ 0.85
TOP3A-220ENST00000585031 AAMPQ13685 434 aa20.39■□□□□ 0.85
TOP3A-220ENST00000585031 ST3GAL2Q16842 350 aa20.39■□□□□ 0.85
TOP3A-220ENST00000585031 ZNF528Q3MIS6 628 aa20.39■□□□□ 0.85
TOP3A-220ENST00000585031 PRR16Q569H4 304 aa20.39■□□□□ 0.85
TOP3A-220ENST00000585031 CYP26C1Q6V0L0 522 aa20.39■□□□□ 0.85
TOP3A-220ENST00000585031 GCOM2Q9BZD3 368 aaPredicted RBP20.39■□□□□ 0.85
TOP3A-220ENST00000585031 ARHGEF3Q9NR81 526 aa20.39■□□□□ 0.85
TOP3A-220ENST00000585031 DISC1Q9NRI5 854 aa20.39■□□□□ 0.85
TOP3A-220ENST00000585031 MARCH5Q9NX47 278 aa20.39■□□□□ 0.85
TOP3A-220ENST00000585031 IGKV6-21A0A0C4DH24 114 aa20.38■□□□□ 0.85
TOP3A-220ENST00000585031 F8W810 466 aa20.38■□□□□ 0.85
TOP3A-220ENST00000585031 TCEANC2Q96MN5 208 aa20.38■□□□□ 0.85
TOP3A-220ENST00000585031 MRPL17Q9NRX2 175 aaKnown RBP20.38■□□□□ 0.85
TOP3A-220ENST00000585031 PRR5-ARHGAP8B1AHC4 643 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 WDR64B1ANS9 1081 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 ANHXE9PGG2 379 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 PAPLNO95428 1278 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 LAMP2P13473 410 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 AK2P54819 239 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 STARD6P59095 220 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 ARHGAP8P85298 464 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 HTR4Q13639 388 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 NECTIN1Q15223 517 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 RTN1Q16799 776 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 CREB3L3Q68CJ9 461 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 PJA1Q8NG27 643 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 SMG7Q92540 1137 aaKnown RBP20.37■□□□□ 0.85
TOP3A-220ENST00000585031 RPS6KC1Q96S38 1066 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 SLC2A4RGQ9NR83 387 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 RBM28Q9NW13 759 aaKnown RBP20.37■□□□□ 0.85
TOP3A-220ENST00000585031 FAN1Q9Y2M0 1017 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 PCDHB2Q9Y5E7 798 aa20.37■□□□□ 0.85
TOP3A-220ENST00000585031 hCG_1984214I3L0E3 225 aa20.36■□□□□ 0.85
TOP3A-220ENST00000585031 SPTLC1O15269 473 aa20.36■□□□□ 0.85
TOP3A-220ENST00000585031 MSH4O15457 936 aa20.36■□□□□ 0.85
TOP3A-220ENST00000585031 SOD2P04179 222 aa20.36■□□□□ 0.85
TOP3A-220ENST00000585031 ALDH2P05091 517 aa20.36■□□□□ 0.85
TOP3A-220ENST00000585031 TGM1P22735 817 aa20.36■□□□□ 0.85
TOP3A-220ENST00000585031 CIITAP33076 1130 aa20.36■□□□□ 0.85
TOP3A-220ENST00000585031 SETQ01105 290 aaPredicted RBP20.36■□□□□ 0.85
TOP3A-220ENST00000585031 MTERF2Q49AM1 385 aa20.36■□□□□ 0.85
TOP3A-220ENST00000585031 UBXN11Q5T124 520 aa20.36■□□□□ 0.85
TOP3A-220ENST00000585031 DCLRE1AQ6PJP8 1040 aa20.36■□□□□ 0.85
TOP3A-220ENST00000585031 MRPL10Q7Z7H8 261 aaKnown RBP20.36■□□□□ 0.85
TOP3A-220ENST00000585031 RNF168Q8IYW5 571 aaPredicted RBP20.36■□□□□ 0.85
TOP3A-220ENST00000585031 ZNF713Q8N859 430 aaPredicted RBP20.36■□□□□ 0.85
TOP3A-220ENST00000585031 STAMQ92783 540 aa20.36■□□□□ 0.85
TOP3A-220ENST00000585031 UNC45AQ9H3U1 944 aa20.36■□□□□ 0.85
TOP3A-220ENST00000585031 FBXO4Q9UKT5 387 aa20.36■□□□□ 0.85
TOP3A-220ENST00000585031 MTF2Q9Y483 593 aaPredicted RBP20.36■□□□□ 0.85
TOP3A-220ENST00000585031 CHMP2AO43633 222 aa20.35■□□□□ 0.85
TOP3A-220ENST00000585031 POMCP01189 267 aa20.35■□□□□ 0.85
TOP3A-220ENST00000585031 ADRB1P08588 477 aa20.35■□□□□ 0.85
TOP3A-220ENST00000585031 RTKNQ9BST9 563 aa20.35■□□□□ 0.85
TOP3A-220ENST00000585031 HERC2P3Q9BVR0 1158 aa20.35■□□□□ 0.85
TOP3A-220ENST00000585031 NIFKQ9BYG3 293 aaKnown RBP20.35■□□□□ 0.85
TOP3A-220ENST00000585031 NT5C3AQ9H0P0 336 aa20.35■□□□□ 0.85
TOP3A-220ENST00000585031 GLT8D2Q9H1C3 349 aa20.35■□□□□ 0.85
TOP3A-220ENST00000585031 IFT122Q9HBG6 1241 aa20.35■□□□□ 0.85
TOP3A-220ENST00000585031 RXFP1Q9HBX9 757 aa20.35■□□□□ 0.85
TOP3A-220ENST00000585031 NCDNQ9UBB6 729 aa20.35■□□□□ 0.85
TOP3A-220ENST00000585031 STK39Q9UEW8 545 aa20.35■□□□□ 0.85
TOP3A-220ENST00000585031 NUMBLQ9Y6R0 609 aa20.35■□□□□ 0.85
TOP3A-220ENST00000585031 TDRD15B5MCY1 1934 aaKnown RBP20.35■□□□□ 0.85
TOP3A-220ENST00000585031 BAHCC1Q9P281 2608 aa20.35■□□□□ 0.85
TOP3A-220ENST00000585031 DCDC2BA2VCK2 349 aa20.34■□□□□ 0.85
TOP3A-220ENST00000585031 SKIP12755 728 aa20.34■□□□□ 0.85
TOP3A-220ENST00000585031 SFPQP23246 707 aaKnown RBP eCLIP20.34■□□□□ 0.85
TOP3A-220ENST00000585031 GPC5P78333 572 aa20.34■□□□□ 0.85
TOP3A-220ENST00000585031 EXOSC10Q01780 885 aaKnown RBP20.34■□□□□ 0.85
TOP3A-220ENST00000585031 PFKFB3Q16875 520 aaPredicted RBP20.34■□□□□ 0.85
TOP3A-220ENST00000585031 CATSPER4Q7RTX7 472 aa20.34■□□□□ 0.85
TOP3A-220ENST00000585031 RHPN2Q8IUC4 686 aa20.34■□□□□ 0.85
TOP3A-220ENST00000585031 B3GALT6Q96L58 329 aa20.34■□□□□ 0.85
TOP3A-220ENST00000585031 TMEM175Q9BSA9 504 aa20.34■□□□□ 0.85
TOP3A-220ENST00000585031 ZMYND12Q9H0C1 365 aa20.34■□□□□ 0.85
TOP3A-220ENST00000585031 MINDY3Q9H8M7 445 aa20.34■□□□□ 0.85
TOP3A-220ENST00000585031 SUCLA2Q9P2R7 463 aaPredicted RBP20.34■□□□□ 0.85
TOP3A-220ENST00000585031 TCEAL9Q9UHQ7 104 aa20.34■□□□□ 0.85
TOP3A-220ENST00000585031 PRG3Q9Y2Y8 225 aaPredicted RBP20.34■□□□□ 0.85
TOP3A-220ENST00000585031 NOTCH4Q99466 2003 aa20.34■□□□□ 0.85
TOP3A-220ENST00000585031 ZBTB43O43298 467 aa20.33■□□□□ 0.85
TOP3A-220ENST00000585031 GLUD1P00367 558 aa20.33■□□□□ 0.85
TOP3A-220ENST00000585031 HOXA11P31270 313 aaPredicted RBP20.33■□□□□ 0.85
TOP3A-220ENST00000585031 ADD1P35611 737 aaKnown RBP20.33■□□□□ 0.85
TOP3A-220ENST00000585031 RAB27AP51159 221 aa20.33■□□□□ 0.85
TOP3A-220ENST00000585031 LMNB2Q03252 620 aa20.33■□□□□ 0.85
TOP3A-220ENST00000585031 SYNE3Q6ZMZ3 975 aa20.33■□□□□ 0.85
TOP3A-220ENST00000585031 GET4Q7L5D6 327 aaPredicted RBP20.33■□□□□ 0.85
TOP3A-220ENST00000585031 PALB2Q86YC2 1186 aa20.33■□□□□ 0.85
TOP3A-220ENST00000585031 COLGALT2Q8IYK4 626 aa20.33■□□□□ 0.85
TOP3A-220ENST00000585031 ZBTB44Q8NCP5 570 aa20.33■□□□□ 0.85
TOP3A-220ENST00000585031 NELL1Q92832 810 aa20.33■□□□□ 0.85
TOP3A-220ENST00000585031 SLC5A5Q92911 643 aa20.33■□□□□ 0.85
TOP3A-220ENST00000585031 FGF14Q92915 247 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms