RNA–Protein interactions for RNA: ENST00000584692.1

RHOT1-216, Transcript of ras homolog family member T1, human

TSL 2

Gene RHOT1, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT1-216	ENST00000584692	SCAND1	P57086	179 aa		6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	BPIFB4	P59827	614 aa		6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	MRPS9	P82933	396 aa	Known RBP	6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	CD69	Q07108	199 aa		6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	SAFB2	Q14151	953 aa	Known RBP eCLIP	6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	PALM2	Q8IXS6	379 aa		6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	PRPF38A	Q8NAV1	312 aa	Known RBP	6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	GIMAP8	Q8ND71	665 aa	Predicted RBP	6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	RAX2	Q96IS3	184 aa		6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	CDK5RAP1	Q96SZ6	601 aa	Known RBP	6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	GPHA2	Q96T91	129 aa		6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	PLA2G12B	Q9BX93	195 aa		6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	TRIM8	Q9BZR9	551 aa		6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	AGO3	Q9H9G7	860 aa	Known RBP	6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	CD248	Q9HCU0	757 aa		6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	ZFR2	Q9UPR6	939 aa	Known RBP	6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	SLC30A1	Q9Y6M5	507 aa		6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692	SHROOM4	Q9ULL8	1493 aa		6.72	□□□□□ -1.33
RHOT1-216	ENST00000584692		A0A1W2PR48	441 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	TOX4	O94842	621 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	XPA	P23025	273 aa	Predicted RBP	6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	NRG3	P56975	720 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	SPIDR	Q14159	915 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	SMN1	Q16637	294 aa	Known RBP	6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	PTPRO	Q16827	1216 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	KCNK18	Q7Z418	384 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	GLB1L2	Q8IW92	636 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	FUK	Q8N0W3	1084 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	CNTD1	Q8N815	330 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	ANKRD53	Q8N9V6	530 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	PIK3C3	Q8NEB9	887 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	SHCBP1	Q8NEM2	672 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	GPATCH3	Q96I76	525 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	WWC2-AS2	Q96NR7	200 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	UIMC1	Q96RL1	719 aa		6.71	□□□□□ -1.34
RHOT1-216	ENST00000584692	JUN	P05412	331 aa	Known RBP	6.7	□□□□□ -1.34
RHOT1-216	ENST00000584692	TGFB2	P61812	414 aa		6.7	□□□□□ -1.34
RHOT1-216	ENST00000584692	KLF1	Q13351	362 aa	Predicted RBP	6.7	□□□□□ -1.34
RHOT1-216	ENST00000584692	RIN1	Q13671	783 aa		6.7	□□□□□ -1.34
RHOT1-216	ENST00000584692	ACAP1	Q15027	740 aa		6.7	□□□□□ -1.34
RHOT1-216	ENST00000584692	INAVA	Q3KP66	663 aa		6.7	□□□□□ -1.34
RHOT1-216	ENST00000584692	LMBR1L	Q6UX01	489 aa		6.7	□□□□□ -1.34
RHOT1-216	ENST00000584692	ADGRE4P	Q86SQ3	457 aa		6.7	□□□□□ -1.34
RHOT1-216	ENST00000584692		Q8TCH9	128 aa		6.7	□□□□□ -1.34
RHOT1-216	ENST00000584692	TGFBRAP1	Q8WUH2	860 aa		6.7	□□□□□ -1.34
RHOT1-216	ENST00000584692	ALG1L2	C9J202	215 aa		6.69	□□□□□ -1.34
RHOT1-216	ENST00000584692	ZNF623	O75123	536 aa		6.69	□□□□□ -1.34
RHOT1-216	ENST00000584692	MTHFD2	P13995	350 aa		6.69	□□□□□ -1.34
RHOT1-216	ENST00000584692	GUCY2F	P51841	1108 aa		6.69	□□□□□ -1.34
RHOT1-216	ENST00000584692	MEF2A	Q02078	507 aa	Predicted RBP	6.69	□□□□□ -1.34
RHOT1-216	ENST00000584692	MGAT5	Q09328	741 aa		6.69	□□□□□ -1.34
RHOT1-216	ENST00000584692	FHL2	Q14192	279 aa		6.69	□□□□□ -1.34
RHOT1-216	ENST00000584692	TAS1R1	Q7RTX1	841 aa		6.69	□□□□□ -1.34
RHOT1-216	ENST00000584692	RPL10L	Q96L21	214 aa	Known RBP	6.69	□□□□□ -1.34
RHOT1-216	ENST00000584692	EDAR	Q9UNE0	448 aa		6.69	□□□□□ -1.34
RHOT1-216	ENST00000584692	ALDH1A2	O94788	518 aa		6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692	MUM1	Q2TAK8	710 aa		6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692	ZNF585A	Q6P3V2	769 aa		6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692	CBARP	Q8N350	705 aa	Predicted RBP	6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692	TSPEAR	Q8WU66	669 aa		6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692	AUTS2	Q8WXX7	1259 aa		6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692	PAWR	Q96IZ0	340 aa	Known RBP	6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692	OR14A2	Q96R54	314 aa		6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692	IL23A	Q9NPF7	189 aa		6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692	CCM2L	Q9NUG4	571 aa	Predicted RBP	6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692	PLA2G3	Q9NZ20	509 aa		6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692	DPP7	Q9UHL4	492 aa		6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692	NOP58	Q9Y2X3	529 aa	Known RBP	6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692	TNFRSF18	Q9Y5U5	241 aa		6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692	WASHC2A	Q641Q2	1341 aa		6.68	□□□□□ -1.34
RHOT1-216	ENST00000584692		A0A1W2PRX2	142 aa		6.67	□□□□□ -1.34
RHOT1-216	ENST00000584692	TRIM75P	A6NK02	468 aa		6.67	□□□□□ -1.34
RHOT1-216	ENST00000584692	TMEM127	O75204	238 aa		6.67	□□□□□ -1.34
RHOT1-216	ENST00000584692	MTNR1B	P49286	362 aa		6.67	□□□□□ -1.34
RHOT1-216	ENST00000584692	INHBE	P58166	350 aa		6.67	□□□□□ -1.34
RHOT1-216	ENST00000584692	FOXL1	Q12952	345 aa		6.67	□□□□□ -1.34
RHOT1-216	ENST00000584692	MTMR1	Q13613	665 aa		6.67	□□□□□ -1.34
RHOT1-216	ENST00000584692	GRM7	Q14831	915 aa		6.67	□□□□□ -1.34
RHOT1-216	ENST00000584692	SYDE2	Q5VT97	1194 aa		6.67	□□□□□ -1.34
RHOT1-216	ENST00000584692	POLN	Q7Z5Q5	900 aa		6.67	□□□□□ -1.34
RHOT1-216	ENST00000584692	QRSL1	Q9H0R6	528 aa	Known RBP	6.67	□□□□□ -1.34
RHOT1-216	ENST00000584692	ING3	Q9NXR8	418 aa		6.67	□□□□□ -1.34
RHOT1-216	ENST00000584692	LTA4H	P09960	611 aa	Known RBP	6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692	COMT	P21964	271 aa		6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692	WNT3A	P56704	352 aa		6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692	EVA1C	P58658	441 aa		6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692	SRSF2	Q01130	221 aa	Known RBP	6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692	ANO4	Q32M45	955 aa		6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692	C19orf54	Q5BKX5	351 aa		6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692	TOR2A	Q5JU69	321 aa		6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692	KRT40	Q6A162	431 aa		6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692		Q6ZSN1	163 aa		6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692	CMTM4	Q8IZR5	234 aa		6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692	MSL3	Q8N5Y2	521 aa	Known RBP	6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692	ENKD1	Q9H0I2	346 aa		6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692	IFT122	Q9HBG6	1241 aa		6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692	DNAJC28	Q9NX36	388 aa		6.66	□□□□□ -1.34
RHOT1-216	ENST00000584692	PCSK5	Q92824	1860 aa		6.65	□□□□□ -1.34
RHOT1-216	ENST00000584692	UBE2QL1	A1L167	161 aa		6.65	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms