RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CSRNP2Q9H175 543 aa22.61■■□□□ 1.21
SS18-224ENST00000584083 POLD4Q9HCU8 107 aa22.61■■□□□ 1.21
SS18-224ENST00000584083 TLR9Q9NR96 1032 aa22.61■■□□□ 1.21
SS18-224ENST00000584083 FOXD4L1Q9NU39 408 aa22.61■■□□□ 1.21
SS18-224ENST00000584083 E9PMD0 336 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 K7ELQ4 463 aaPredicted RBP22.6■■□□□ 1.21
SS18-224ENST00000584083 ZC3H11AO75152 810 aaKnown RBP eCLIP22.6■■□□□ 1.21
SS18-224ENST00000584083 EYA4O95677 639 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 ITGA4P13612 1032 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 ARF4P18085 180 aaPredicted RBP22.6■■□□□ 1.21
SS18-224ENST00000584083 BCAR1P56945 870 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 PLCB3Q01970 1234 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 PPP2R5AQ15172 486 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 AMHR2Q16671 573 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 LEXMQ3ZCV2 418 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 AGMOQ6ZNB7 445 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 DEPTORQ8TB45 409 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 BSNDQ8WZ55 320 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 MRPS27Q92552 414 aaKnown RBP22.6■■□□□ 1.21
SS18-224ENST00000584083 INTS4Q96HW7 963 aaKnown RBP22.6■■□□□ 1.21
SS18-224ENST00000584083 IFT74Q96LB3 600 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 MMTAG2Q9BU76 263 aaKnown RBP22.6■■□□□ 1.21
SS18-224ENST00000584083 EIF2AQ9BY44 585 aaKnown RBP22.6■■□□□ 1.21
SS18-224ENST00000584083 TRIM6Q9C030 488 aaPredicted RBP22.6■■□□□ 1.21
SS18-224ENST00000584083 C2orf40Q9H1Z8 148 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 RSAD1Q9HA92 442 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 TBC1D13Q9NVG8 400 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 PCDHGC5Q9Y5F6 944 aa22.6■■□□□ 1.21
SS18-224ENST00000584083 CNTNAP2Q9UHC6 1331 aa22.59■■□□□ 1.21
SS18-224ENST00000584083 H3BQ06 376 aaPredicted RBP22.59■■□□□ 1.21
SS18-224ENST00000584083 B4GALT5O43286 388 aa22.59■■□□□ 1.21
SS18-224ENST00000584083 NCLP19338 710 aaKnown RBP22.59■■□□□ 1.21
SS18-224ENST00000584083 GTF2F1P35269 517 aaKnown RBP eCLIP22.59■■□□□ 1.21
SS18-224ENST00000584083 NAMPTP43490 491 aa22.59■■□□□ 1.21
SS18-224ENST00000584083 ERVFC1P60507 584 aa22.59■■□□□ 1.21
SS18-224ENST00000584083 TMEM132AQ24JP5 1023 aa22.59■■□□□ 1.21
SS18-224ENST00000584083 ADGRD2Q7Z7M1 963 aa22.59■■□□□ 1.21
SS18-224ENST00000584083 RBM23Q86U06 439 aaKnown RBP22.59■■□□□ 1.21
SS18-224ENST00000584083 KIFAP3Q92845 792 aa22.59■■□□□ 1.21
SS18-224ENST00000584083 CDK5RAP3Q96JB5 506 aa22.59■■□□□ 1.21
SS18-224ENST00000584083 GBP3Q9H0R5 595 aa22.59■■□□□ 1.21
SS18-224ENST00000584083 PRMT7Q9NVM4 692 aaPredicted RBP22.59■■□□□ 1.21
SS18-224ENST00000584083 LZTS1Q9Y250 596 aa22.59■■□□□ 1.21
SS18-224ENST00000584083 IPPQ9Y573 584 aa22.59■■□□□ 1.21
SS18-224ENST00000584083 TTC28Q96AY4 2481 aa22.58■■□□□ 1.21
SS18-224ENST00000584083 NT5C1B-RDH14C9J2C7 533 aa22.58■■□□□ 1.21
SS18-224ENST00000584083 BMP15O95972 392 aa22.58■■□□□ 1.21
SS18-224ENST00000584083 LIG1P18858 919 aa22.58■■□□□ 1.21
SS18-224ENST00000584083 SYT1P21579 422 aa22.58■■□□□ 1.21
SS18-224ENST00000584083 NRIP1P48552 1158 aa22.58■■□□□ 1.21
SS18-224ENST00000584083 COL19A1Q14993 1142 aa22.58■■□□□ 1.21
SS18-224ENST00000584083 CDCA2Q69YH5 1023 aaPredicted RBP22.58■■□□□ 1.21
SS18-224ENST00000584083 PDE12Q6L8Q7 609 aaKnown RBP22.58■■□□□ 1.21
SS18-224ENST00000584083 CDR2LQ86X02 465 aaPredicted RBP22.58■■□□□ 1.21
SS18-224ENST00000584083 HACE1Q8IYU2 909 aa22.58■■□□□ 1.21
SS18-224ENST00000584083 SLC39A11Q8N1S5 342 aa22.58■■□□□ 1.21
SS18-224ENST00000584083 SMG8Q8ND04 991 aaKnown RBP22.58■■□□□ 1.21
SS18-224ENST00000584083 NECAB3Q96P71 396 aaPredicted RBP22.58■■□□□ 1.21
SS18-224ENST00000584083 APOL6Q9BWW8 343 aa22.58■■□□□ 1.21
SS18-224ENST00000584083 NRDE2Q9H7Z3 1164 aa22.58■■□□□ 1.21
SS18-224ENST00000584083 TLE6Q9H808 572 aa22.58■■□□□ 1.21
SS18-224ENST00000584083 UBN1Q9NPG3 1134 aa22.58■■□□□ 1.21
SS18-224ENST00000584083 XIRP2A4UGR9 3374 aa22.57■■□□□ 1.2
SS18-224ENST00000584083 SSBP05455 408 aaKnown RBP eCLIP22.57■■□□□ 1.2
SS18-224ENST00000584083 MAPK6Q16659 721 aa22.57■■□□□ 1.2
SS18-224ENST00000584083 CTC1Q2NKJ3 1217 aa22.57■■□□□ 1.2
SS18-224ENST00000584083 SLC27A1Q6PCB7 646 aa22.57■■□□□ 1.2
SS18-224ENST00000584083 KCNK18Q7Z418 384 aa22.57■■□□□ 1.2
SS18-224ENST00000584083 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.57■■□□□ 1.2
SS18-224ENST00000584083 PRIMPOLQ96LW4 560 aa22.57■■□□□ 1.2
SS18-224ENST00000584083 FAM193BQ96PV7 902 aaPredicted RBP22.57■■□□□ 1.2
SS18-224ENST00000584083 PLIN2Q99541 437 aa22.57■■□□□ 1.2
SS18-224ENST00000584083 ENTPD7Q9NQZ7 604 aa22.57■■□□□ 1.2
SS18-224ENST00000584083 KANSL3Q9P2N6 904 aa22.57■■□□□ 1.2
SS18-224ENST00000584083 HES2Q9Y543 173 aa22.57■■□□□ 1.2
SS18-224ENST00000584083 VCANP13611 3396 aa22.57■■□□□ 1.2
SS18-224ENST00000584083 A0A1B0GUA9 196 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 LINC01565O15544 149 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 NPTXRO95502 500 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 POMCP01189 267 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 AFF1P51825 1210 aaKnown RBP22.56■■□□□ 1.2
SS18-224ENST00000584083 PRPF4BQ13523 1007 aaKnown RBP22.56■■□□□ 1.2
SS18-224ENST00000584083 SF3A1Q15459 793 aaKnown RBP22.56■■□□□ 1.2
SS18-224ENST00000584083 PLPP4Q5VZY2 271 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 PTCRAQ6ISU1 281 aaPredicted RBP22.56■■□□□ 1.2
SS18-224ENST00000584083 PPP4R3CPQ6ZMV5 832 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 TMC7Q7Z402 723 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 CABP7Q86V35 215 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 TMEM169Q96HH4 297 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 AK8Q96MA6 479 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 PNMA5Q96PV4 448 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 TCF25Q9BQ70 676 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 NT5C3AQ9H0P0 336 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 RNF39Q9H2S5 420 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 FZD8Q9H461 694 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 TDRD15B5MCY1 1934 aaKnown RBP22.56■■□□□ 1.2
SS18-224ENST00000584083 MYH11P35749 1972 aa22.56■■□□□ 1.2
SS18-224ENST00000584083 NCOR1O75376 2440 aa22.55■■□□□ 1.2
SS18-224ENST00000584083 CARNS1A5YM72 827 aa22.55■■□□□ 1.2
SS18-224ENST00000584083 TNFRSF10AO00220 468 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms