RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 MBTPS1Q14703 1052 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 GPNMBQ14956 572 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 BMT2Q1RMZ1 405 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 KLHL40Q2TBA0 621 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 SLC24A5Q71RS6 500 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 FAM228AQ86W67 206 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 MAP4K3Q8IVH8 894 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 KSR1Q8IVT5 923 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 DBF4BQ8NFT6 615 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 BSNDQ8WZ55 320 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 HERVK_113Q902F9 699 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 BADQ92934 168 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 ZBTB10Q96DT7 871 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 TSPAN18Q96SJ8 248 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 FIZ1Q96SL8 496 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 GDF15Q99988 308 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 ADPGKQ9BRR6 497 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 NUP62CLQ9H1M0 184 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 TSPYL2Q9H2G4 693 aaPredicted RBP10.24□□□□□ -0.77
UBBP4-201ENST00000583708 CDHR5Q9HBB8 845 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 UBN1Q9NPG3 1134 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 RGS18Q9NS28 235 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 TBX20Q9UMR3 447 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 GINS2Q9Y248 185 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 TNFSF13BQ9Y275 285 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 CNTNAP2Q9UHC6 1331 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 EVPLQ92817 2033 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 ZMYM2Q9UBW7 1377 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 NPHP3-ACAD11A0A0J9YXS1 232 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 A0A0U1RQF3 1178 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 SLC16A4O15374 487 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 HOXA2O43364 376 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 TOM1L1O75674 476 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 PRKCBP05771 671 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 STAG3L1P0CL83 205 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 PRKCSHP14314 528 aaPredicted RBP10.23□□□□□ -0.77
UBBP4-201ENST00000583708 CSF2RAP15509 400 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 ITGB8P26012 769 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 RAD51AP2Q09MP3 1159 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 NFX1Q12986 1120 aaKnown RBP10.23□□□□□ -0.77
UBBP4-201ENST00000583708 STIM1Q13586 685 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 DSC3Q14574 896 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 AMHR2Q16671 573 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 DCAF4L1Q3SXM0 396 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 KMT5BQ4FZB7 885 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 CCDC183Q5T5S1 534 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 L1TD1Q5T7N2 865 aaKnown RBP10.23□□□□□ -0.77
UBBP4-201ENST00000583708 ZNF658Q5TYW1 1059 aaPredicted RBP10.23□□□□□ -0.77
UBBP4-201ENST00000583708 EPM2AIP1Q7L775 607 aaPredicted RBP10.23□□□□□ -0.77
UBBP4-201ENST00000583708 HS2ST1Q7LGA3 356 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 SFR1Q86XK3 245 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 GUF1Q8N442 669 aaKnown RBP10.23□□□□□ -0.77
UBBP4-201ENST00000583708 STAMQ92783 540 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 PGBD4Q96DM1 585 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 AGO3Q9H9G7 860 aaKnown RBP10.23□□□□□ -0.77
UBBP4-201ENST00000583708 KIAA1586Q9HCI6 787 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 PCDHA5Q9Y5H7 936 aa10.23□□□□□ -0.77
UBBP4-201ENST00000583708 MKI67P46013 3256 aaKnown RBP10.22□□□□□ -0.77
UBBP4-201ENST00000583708 ARID2Q68CP9 1835 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 K7ENM7 598 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 ENPP3O14638 875 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 TSPAN1O60635 241 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 GCNT3O95395 438 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 LDHAP00338 332 aaKnown RBP10.22□□□□□ -0.77
UBBP4-201ENST00000583708 AMHP03971 560 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 MCF2P10911 925 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 GARTP22102 1010 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 HOXA11P31270 313 aaPredicted RBP10.22□□□□□ -0.77
UBBP4-201ENST00000583708 CD52P31358 61 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 TMEM240Q5SV17 173 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 SLC27A1Q6PCB7 646 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 RBM43Q6ZSC3 357 aaKnown RBP10.22□□□□□ -0.77
UBBP4-201ENST00000583708 MRPL10Q7Z7H8 261 aaKnown RBP10.22□□□□□ -0.77
UBBP4-201ENST00000583708 C12orf56Q8IXR9 622 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 MYOCDQ8IZQ8 938 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 MLKLQ8NB16 471 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 GPT2Q8TD30 523 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 TMEM40Q8WWA1 233 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 SCLYQ96I15 445 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 ACO2Q99798 780 aaKnown RBP10.22□□□□□ -0.77
UBBP4-201ENST00000583708 ANP32EQ9BTT0 268 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 GBP3Q9H0R5 595 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 BLZF1Q9H2G9 400 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 MINDY3Q9H8M7 445 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 TBC1D7Q9P0N9 293 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 DACH1Q9UI36 760 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 ZMYND8Q9ULU4 1186 aaPredicted RBP10.22□□□□□ -0.77
UBBP4-201ENST00000583708 STYXL1Q9Y6J8 313 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 UMODL1Q5DID0 1318 aa10.22□□□□□ -0.77
UBBP4-201ENST00000583708 PDE4DIPQ5VU43 2346 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 H0YGN5 161 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 PDXKO00764 312 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 CLDN3O15551 220 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 ARF4P18085 180 aaPredicted RBP10.21□□□□□ -0.77
UBBP4-201ENST00000583708 PROZP22891 400 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 RPL13P26373 211 aaKnown RBP10.21□□□□□ -0.77
UBBP4-201ENST00000583708 NMT1P30419 496 aaKnown RBP10.21□□□□□ -0.77
UBBP4-201ENST00000583708 MAGEA10P43363 369 aaPredicted RBP10.21□□□□□ -0.77
UBBP4-201ENST00000583708 KCNJ6P48051 423 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 LIG4P49917 911 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms