RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 PRKD3O94806 890 aa5.03□□□□□ -1.6
VAPA-206ENST00000583475 HIBADHP31937 336 aaKnown RBP5.03□□□□□ -1.6
VAPA-206ENST00000583475 NRG3P56975 720 aa5.03□□□□□ -1.6
VAPA-206ENST00000583475 SCAND1P57086 179 aa5.03□□□□□ -1.6
VAPA-206ENST00000583475 FAPQ12884 760 aa5.03□□□□□ -1.6
VAPA-206ENST00000583475 UBE3CQ15386 1083 aa5.03□□□□□ -1.6
VAPA-206ENST00000583475 RNF219Q5W0B1 726 aaPredicted RBP5.03□□□□□ -1.6
VAPA-206ENST00000583475 LMBR1LQ6UX01 489 aa5.03□□□□□ -1.6
VAPA-206ENST00000583475 DDX42Q86XP3 938 aaKnown RBP eCLIP5.03□□□□□ -1.6
VAPA-206ENST00000583475 MSL3Q8N5Y2 521 aaKnown RBP5.03□□□□□ -1.6
VAPA-206ENST00000583475 EXTL1Q92935 676 aa5.03□□□□□ -1.6
VAPA-206ENST00000583475 TLR9Q9NR96 1032 aa5.03□□□□□ -1.6
VAPA-206ENST00000583475 NCDNQ9UBB6 729 aa5.03□□□□□ -1.6
VAPA-206ENST00000583475 RCAN3Q9UKA8 241 aa5.03□□□□□ -1.6
VAPA-206ENST00000583475 EDARQ9UNE0 448 aa5.03□□□□□ -1.6
VAPA-206ENST00000583475 STC2O76061 302 aa5.02□□□□□ -1.61
VAPA-206ENST00000583475 TNFRSF1AP19438 455 aa5.02□□□□□ -1.61
VAPA-206ENST00000583475 NPEPPSP55786 919 aa5.02□□□□□ -1.61
VAPA-206ENST00000583475 HHEXQ03014 270 aa5.02□□□□□ -1.61
VAPA-206ENST00000583475 SPATS2Q86XZ4 545 aaKnown RBP5.02□□□□□ -1.61
VAPA-206ENST00000583475 GLB1L2Q8IW92 636 aa5.02□□□□□ -1.61
VAPA-206ENST00000583475 ATL2Q8NHH9 583 aa5.02□□□□□ -1.61
VAPA-206ENST00000583475 COG1Q8WTW3 980 aa5.02□□□□□ -1.61
VAPA-206ENST00000583475 TGFBRAP1Q8WUH2 860 aa5.02□□□□□ -1.61
VAPA-206ENST00000583475 RAX2Q96IS3 184 aa5.02□□□□□ -1.61
VAPA-206ENST00000583475 DPP7Q9UHL4 492 aa5.02□□□□□ -1.61
VAPA-206ENST00000583475 CAPN14A8MX76 684 aa5.01□□□□□ -1.61
VAPA-206ENST00000583475 HOXA3O43365 443 aaPredicted RBP5.01□□□□□ -1.61
VAPA-206ENST00000583475 CFBP00751 764 aa5.01□□□□□ -1.61
VAPA-206ENST00000583475 AMHP03971 560 aa5.01□□□□□ -1.61
VAPA-206ENST00000583475 LTA4HP09960 611 aaKnown RBP5.01□□□□□ -1.61
VAPA-206ENST00000583475 CASRP41180 1078 aa5.01□□□□□ -1.61
VAPA-206ENST00000583475 GPR3P46089 330 aa5.01□□□□□ -1.61
VAPA-206ENST00000583475 SPIDRQ14159 915 aa5.01□□□□□ -1.61
VAPA-206ENST00000583475 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.01□□□□□ -1.61
VAPA-206ENST00000583475 USP39Q53GS9 565 aaKnown RBP5.01□□□□□ -1.61
VAPA-206ENST00000583475 C19orf54Q5BKX5 351 aa5.01□□□□□ -1.61
VAPA-206ENST00000583475 FKBP15Q5T1M5 1219 aa5.01□□□□□ -1.61
VAPA-206ENST00000583475 ABHD15Q6UXT9 468 aa5.01□□□□□ -1.61
VAPA-206ENST00000583475 KCNK18Q7Z418 384 aa5.01□□□□□ -1.61
VAPA-206ENST00000583475 IL17DQ8TAD2 202 aa5.01□□□□□ -1.61
VAPA-206ENST00000583475 AHCYL2Q96HN2 611 aaKnown RBP5.01□□□□□ -1.61
VAPA-206ENST00000583475 ZNF512Q96ME7 567 aaPredicted RBP5.01□□□□□ -1.61
VAPA-206ENST00000583475 C14orf119Q9NWQ9 140 aa5.01□□□□□ -1.61
VAPA-206ENST00000583475 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
VAPA-206ENST00000583475 K7ESF4 209 aa5□□□□□ -1.61
VAPA-206ENST00000583475 TMEM127O75204 238 aa5□□□□□ -1.61
VAPA-206ENST00000583475 CTSSP25774 331 aa5□□□□□ -1.61
VAPA-206ENST00000583475 ACRV1P26436 265 aa5□□□□□ -1.61
VAPA-206ENST00000583475 ERVK-21P61565 698 aa5□□□□□ -1.61
VAPA-206ENST00000583475 MRPS9P82933 396 aaKnown RBP5□□□□□ -1.61
VAPA-206ENST00000583475 CDK17Q00537 523 aa5□□□□□ -1.61
VAPA-206ENST00000583475 ELAVL1Q15717 326 aaKnown RBP5□□□□□ -1.61
VAPA-206ENST00000583475 RNF187Q5TA31 235 aaPredicted RBP5□□□□□ -1.61
VAPA-206ENST00000583475 THEMISQ8N1K5 641 aaPredicted RBP5□□□□□ -1.61
VAPA-206ENST00000583475 ANKRD35Q8N283 1001 aa5□□□□□ -1.61
VAPA-206ENST00000583475 LILRA3Q8N6C8 439 aaPredicted RBP5□□□□□ -1.61
VAPA-206ENST00000583475 OR5M3Q8NGP4 307 aa5□□□□□ -1.61
VAPA-206ENST00000583475 TSPEARQ8WU66 669 aa5□□□□□ -1.61
VAPA-206ENST00000583475 SNX33Q8WV41 574 aa5□□□□□ -1.61
VAPA-206ENST00000583475 MIEF2Q96C03 454 aa5□□□□□ -1.61
VAPA-206ENST00000583475 ATP8A1Q9Y2Q0 1164 aa5□□□□□ -1.61
VAPA-206ENST00000583475 NRP1O14786 923 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 SCNN1GP51170 649 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 WNT3AP56704 352 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 AMPD3Q01432 767 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 MEF2AQ02078 507 aaPredicted RBP4.99□□□□□ -1.61
VAPA-206ENST00000583475 FOXE3Q13461 319 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 RRP1BQ14684 758 aaKnown RBP4.99□□□□□ -1.61
VAPA-206ENST00000583475 MUM1Q2TAK8 710 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 NRN1LQ496H8 165 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 MFSD5Q6N075 450 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 RNF207Q6ZRF8 634 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 Q6ZRM9 215 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 C1orf210Q8IVY1 113 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 GSPT2Q8IYD1 628 aaKnown RBP4.99□□□□□ -1.61
VAPA-206ENST00000583475 ELOA2Q8IYF1 753 aaPredicted RBP4.99□□□□□ -1.61
VAPA-206ENST00000583475 ARL8AQ96BM9 186 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 ZNF747Q9BV97 191 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 TRIM8Q9BZR9 551 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 QRSL1Q9H0R6 528 aaKnown RBP4.99□□□□□ -1.61
VAPA-206ENST00000583475 SLC5A4Q9NY91 659 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 MCM8Q9UJA3 840 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 GIT1Q9Y2X7 761 aa4.99□□□□□ -1.61
VAPA-206ENST00000583475 XDHP47989 1333 aa4.98□□□□□ -1.61
VAPA-206ENST00000583475 MFAP3LO75121 409 aa4.98□□□□□ -1.61
VAPA-206ENST00000583475 RABGGTBP53611 331 aa4.98□□□□□ -1.61
VAPA-206ENST00000583475 DUSP2Q05923 314 aa4.98□□□□□ -1.61
VAPA-206ENST00000583475 MRPL49Q13405 166 aaKnown RBP4.98□□□□□ -1.61
VAPA-206ENST00000583475 FAM214AQ32MH5 1076 aa4.98□□□□□ -1.61
VAPA-206ENST00000583475 TOR2AQ5JU69 321 aa4.98□□□□□ -1.61
VAPA-206ENST00000583475 C1QL3Q5VWW1 255 aa4.98□□□□□ -1.61
VAPA-206ENST00000583475 TMPRSS6Q8IU80 811 aa4.98□□□□□ -1.61
VAPA-206ENST00000583475 Q8N1X5 172 aa4.98□□□□□ -1.61
VAPA-206ENST00000583475 MDGA1Q8NFP4 955 aa4.98□□□□□ -1.61
VAPA-206ENST00000583475 AUTS2Q8WXX7 1259 aa4.98□□□□□ -1.61
VAPA-206ENST00000583475 FATE1Q969F0 183 aa4.98□□□□□ -1.61
VAPA-206ENST00000583475 ZNF503Q96F45 646 aa4.98□□□□□ -1.61
VAPA-206ENST00000583475 ZNF703Q9H7S9 590 aaPredicted RBP4.98□□□□□ -1.61
VAPA-206ENST00000583475 IFT122Q9HBG6 1241 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms