RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 TRIM67Q6ZTA4 783 aa10.05□□□□□ -0.8
SKA2-207ENST00000583380 SYDE1Q6ZW31 735 aaPredicted RBP10.05□□□□□ -0.8
SKA2-207ENST00000583380 NEK10Q6ZWH5 1172 aa10.05□□□□□ -0.8
SKA2-207ENST00000583380 AHI1Q8N157 1196 aa10.05□□□□□ -0.8
SKA2-207ENST00000583380 ANKK1Q8NFD2 765 aa10.05□□□□□ -0.8
SKA2-207ENST00000583380 RASSF5Q8WWW0 418 aa10.05□□□□□ -0.8
SKA2-207ENST00000583380 STARD8Q92502 1023 aa10.05□□□□□ -0.8
SKA2-207ENST00000583380 ARHGEF2Q92974 986 aaKnown RBP10.05□□□□□ -0.8
SKA2-207ENST00000583380 EAF2Q96CJ1 260 aaPredicted RBP10.05□□□□□ -0.8
SKA2-207ENST00000583380 TRIM47Q96LD4 638 aa10.05□□□□□ -0.8
SKA2-207ENST00000583380 ZCWPW1Q9H0M4 648 aa10.05□□□□□ -0.8
SKA2-207ENST00000583380 SLC38A10Q9HBR0 1119 aa10.05□□□□□ -0.8
SKA2-207ENST00000583380 ZNF180Q9UJW8 692 aa10.05□□□□□ -0.8
SKA2-207ENST00000583380 DNAJC12Q9UKB3 198 aa10.05□□□□□ -0.8
SKA2-207ENST00000583380 ZMYND8Q9ULU4 1186 aaPredicted RBP10.05□□□□□ -0.8
SKA2-207ENST00000583380 HPS5Q9UPZ3 1129 aa10.05□□□□□ -0.8
SKA2-207ENST00000583380 ITM2BQ9Y287 266 aa10.05□□□□□ -0.8
SKA2-207ENST00000583380 B3GNT3Q9Y2A9 372 aa10.05□□□□□ -0.8
SKA2-207ENST00000583380 RCCD1A6NED2 376 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 FBP2O00757 339 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 KMOO15229 486 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 GYG2O15488 501 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 ZBTB43O43298 467 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 ADCY3O60266 1144 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 ABCB7O75027 752 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 DNAJC6O75061 913 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 RPN1P04843 607 aaKnown RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 ALOX5P09917 674 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 HSPD1P10809 573 aaKnown RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 HSPA8P11142 646 aaKnown RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 CD44P16070 742 aaKnown RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 RXRAP19793 462 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 M6PRP20645 277 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 CCNE1P24864 410 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 CHRNA3P32297 505 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 S100A5P33763 92 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 LONP1P36776 959 aaKnown RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 EIF4A3P38919 411 aaKnown RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 MTIF2P46199 727 aaKnown RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 MXI1P50539 228 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 FOSBP53539 338 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 STX17P56962 302 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 PTENP60484 403 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 COG7P83436 770 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 RASSF7Q02833 373 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 CDK18Q07002 472 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 TEFQ10587 303 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 CAMK2BQ13554 666 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 RAPGEF1Q13905 1077 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 ARHGEF6Q15052 776 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 DDB1Q16531 1140 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 SLC18A3Q16572 532 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 ASTE1Q2TB18 679 aaPredicted RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 ARL13BQ3SXY8 428 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 HERC4Q5GLZ8 1057 aaPredicted RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 SH3D19Q5HYK7 790 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 LRRC8BQ6P9F7 803 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 STOX1Q6ZVD7 989 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 ANO5Q75V66 913 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 PODNQ7Z5L7 613 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 C2CD5Q86YS7 1000 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 MB21D2Q8IYB1 491 aaPredicted RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 BBOF1Q8ND07 529 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 UTP4Q969X6 686 aaKnown RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 MED30Q96HR3 178 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 NSL1Q96IY1 281 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 PRICKLE1Q96MT3 831 aaPredicted RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 NOC4LQ9BVI4 516 aaKnown RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 LRRC27Q9C0I9 530 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 SSU72Q9NP77 194 aaKnown RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 VPS45Q9NRW7 570 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 ETNK2Q9NVF9 386 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 SEPT10Q9P0V9 454 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 KIAA1522Q9P206 1035 aaPredicted RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 CRNNQ9UBG3 495 aaPredicted RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 BIN2Q9UBW5 565 aaPredicted RBP10.04□□□□□ -0.8
SKA2-207ENST00000583380 SEPT3Q9UH03 358 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 LGALS13Q9UHV8 139 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 RABGEF1Q9UJ41 708 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 GNPTGQ9UJJ9 305 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 SORCS3Q9UPU3 1222 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 TRAF3IP3Q9Y228 551 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 CD2APQ9Y5K6 639 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 SCINQ9Y6U3 715 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 LAMA4Q16363 1823 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 LMTK3Q96Q04 1460 aa10.04□□□□□ -0.8
SKA2-207ENST00000583380 ESYT3A0FGR9 886 aa10.03□□□□□ -0.8
SKA2-207ENST00000583380 GNAT3A8MTJ3 354 aa10.03□□□□□ -0.8
SKA2-207ENST00000583380 TMEM114B3SHH9 223 aa10.03□□□□□ -0.8
SKA2-207ENST00000583380 EIF3FO00303 357 aaPredicted RBP10.03□□□□□ -0.8
SKA2-207ENST00000583380 XPO1O14980 1071 aaKnown RBP10.03□□□□□ -0.8
SKA2-207ENST00000583380 ZNF609O15014 1411 aa10.03□□□□□ -0.8
SKA2-207ENST00000583380 MCF2LO15068 1137 aa10.03□□□□□ -0.8
SKA2-207ENST00000583380 RNF113AO15541 343 aaKnown RBP10.03□□□□□ -0.8
SKA2-207ENST00000583380 DENRO43583 198 aaKnown RBP10.03□□□□□ -0.8
SKA2-207ENST00000583380 SPAG7O75391 227 aa10.03□□□□□ -0.8
SKA2-207ENST00000583380 RHOBTB3O94955 611 aa10.03□□□□□ -0.8
SKA2-207ENST00000583380 TTLL1O95922 423 aa10.03□□□□□ -0.8
SKA2-207ENST00000583380 MUTP22033 750 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms