RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 PPP1R16BQ96T49 567 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 KCTD10Q9H3F6 313 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 FZD8Q9H461 694 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 TMEM206Q9H813 350 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 CDHR5Q9HBB8 845 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 RWDD2AQ9UIY3 292 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 PHKA2P46019 1235 aa17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 CRYBB1P53674 252 aaPredicted RBP17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 STX17P56962 302 aa17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 MRPS6P82932 125 aaKnown RBP17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 PAK1Q13153 545 aa17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 KIZQ2M2Z5 673 aa17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ANKRD40Q6AI12 368 aa17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ENOX1Q8TC92 643 aaKnown RBP17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 P2RX5Q93086 422 aa17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 FAM161BQ96MY7 647 aa17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 TOX2Q96NM4 488 aa17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 CELF4Q9BZC1 486 aaKnown RBP17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 GCOM2Q9BZD3 368 aaPredicted RBP17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 CCDC113Q9H0I3 377 aa17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 CTNND2Q9UQB3 1225 aa17.96■□□□□ 0.47
CDK5RAP3-228ENST00000583363 MROH7Q68CQ1 1323 aa17.96■□□□□ 0.46
CDK5RAP3-228ENST00000583363 PHLPP2Q6ZVD8 1323 aa17.96■□□□□ 0.46
CDK5RAP3-228ENST00000583363 EYSQ5T1H1 3165 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 PDXKO00764 312 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TGFB1I1O43294 461 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 CHRNA1P02708 482 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 THPOP40225 353 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 PMS1P54277 932 aaKnown RBP17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 MBTD1Q05BQ5 628 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 MGAT3Q09327 533 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 IQCB1Q15051 598 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 FAM187BQ17R55 369 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 FAM26DQ5JW98 314 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 FOXR2Q6PJQ5 311 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 MAP4K3Q8IVH8 894 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 MINDY3Q9H8M7 445 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 CBX8Q9HC52 389 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 EXOC7Q9UPT5 735 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TRPV2Q9Y5S1 764 aa17.95■□□□□ 0.46
CDK5RAP3-228ENST00000583363 BICDL2A1A5D9 508 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 INO80B-WBP1J3KQ70 363 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TLR3O15455 904 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 CAND2O75155 1236 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 IQCF3P0C7M6 154 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 DARSP14868 501 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 EIF4BP23588 611 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 STRN3Q13033 797 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 MAPK6Q16659 721 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 ZCWPW2Q504Y3 356 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TTI2Q6NXR4 508 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 DHX40Q8IX18 779 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 SYCP3Q8IZU3 236 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 FAM200AQ8TCP9 573 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 SCLT1Q96NL6 688 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 OSMRQ99650 979 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 COL25A1Q9BXS0 654 aaPredicted RBP17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 INO80BQ9C086 356 aaPredicted RBP17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 GBP3Q9H0R5 595 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 RBSNQ9H1K0 784 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 IKZF4Q9H2S9 585 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TYW1Q9NV66 732 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TRAF3IP3Q9Y228 551 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 GINS2Q9Y248 185 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 ATP11BQ9Y2G3 1177 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 CDY2AQ9Y6F7 541 aa17.94■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TRIM49BA6NDI0 452 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 SMTNL1A8MU46 457 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 M0QZ92 97 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 ACKR2O00590 384 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 PQBP1O60828 265 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 CSDE1O75534 798 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 PIGRP01833 764 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 PRKCBP05771 671 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 CKBP12277 381 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 SNRPFP62306 86 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TLE2Q04725 743 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 RBL2Q08999 1139 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 NCAPHQ15003 741 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TRIM60Q495X7 471 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 SPATA1Q5VX52 437 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TSG101Q99816 390 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 DUSP9Q99956 384 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 PRMT7Q9NVM4 692 aaPredicted RBP17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 PRKAG2Q9UGJ0 569 aa17.93■□□□□ 0.46
CDK5RAP3-228ENST00000583363 ZMYM2Q9UBW7 1377 aa17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 DCDC2CA8MYV0 355 aa17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 IKBKBO14920 756 aa17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 CALUO43852 315 aaPredicted RBP17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 EDN1P05305 212 aa17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 LRRC63Q05C16 580 aa17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 FAAP100Q0VG06 881 aa17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 PCBP1Q15365 356 aaKnown RBP eCLIP17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 SHHQ15465 462 aa17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 NFIL3Q16649 462 aa17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 AMHR2Q16671 573 aa17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 ZNF618Q5T7W0 954 aa17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 GOLGA5Q8TBA6 731 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms