RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 NASPP49321 788 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 SLC12A3P55017 1021 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 PEX3P56589 373 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 DMP1Q13316 513 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 MAPK6Q16659 721 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 AMHR2Q16671 573 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 PTPROQ16827 1216 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 UBXN11Q5T124 520 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 USP49Q70CQ1 688 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 LRRC43Q8N309 656 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 KRI1Q8N9T8 703 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 SYMPKQ92797 1274 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 CCDC51Q96ER9 411 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 EPSTI1Q96J88 318 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 TIPINQ9BVW5 301 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 PLVAPQ9BX97 442 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 TRIM6Q9C030 488 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 CCSER1Q9C0I3 900 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 AAASQ9NRG9 546 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 TYW1Q9NV66 732 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 HCSTQ9UBK5 93 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 CCDC39Q9UFE4 941 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 INPP5FQ9Y2H2 1132 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 SPTLC2O15270 562 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 ZNF623O75123 536 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 CSPG5O95196 566 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 PRKCBP05771 671 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 GUCY2CP25092 1073 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 MAPK7Q13164 816 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 PRPF4BQ13523 1007 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 MCM6Q14566 821 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 SKIV2LQ15477 1246 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 GLB1LQ6UWU2 654 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 GPBP1Q86WP2 473 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 CDR2LQ86X02 465 aaPredicted RBP13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 DAW1Q8N136 415 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 LINC00301Q8NCQ3 95 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 RAD54LQ92698 747 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 PRIMPOLQ96LW4 560 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 EIF2AQ9BY44 585 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 MRPL9Q9BYD2 267 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 FZD8Q9H461 694 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 LMCD1Q9NZU5 365 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 KCND2Q9NZV8 630 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 PCDHB12Q9Y5F1 795 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 MORC2Q9Y6X9 1032 aaPredicted RBP13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 KIAA1671Q9BY89 1806 aa13.91□□□□□ -0.18
SMARCE1-218ENST00000582955 PRRC2BQ5JSZ5 2229 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 NPHP3-ACAD11A0A0J9YXS1 232 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 MEIS3P2A8K0S8 358 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 SFI1A8K8P3 1242 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 GRM6O15303 877 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 NPTXRO95502 500 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 YEATS4O95619 227 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 KRT18P05783 430 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 ITGA4P13612 1032 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 LAG3P18627 525 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 NPTX2P47972 431 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 EFNA5P52803 228 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 FAM187BQ17R55 369 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 SLC27A1Q6PCB7 646 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 LRRC55Q6ZSA7 311 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 MRPL10Q7Z7H8 261 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 HACE1Q8IYU2 909 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 KLHL23Q8NBE8 558 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 COLGALT1Q8NBJ5 622 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 CNNM3Q8NE01 707 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 LRRC15Q8TF66 581 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 LARP4BQ92615 738 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 P2RX5Q93086 422 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 MRPL38Q96DV4 380 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 APOL6Q9BWW8 343 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 CCDC113Q9H0I3 377 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 CWH43Q9H720 699 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 RSAD1Q9HA92 442 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 ALG13Q9NP73 1137 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 KMT5AQ9NQR1 393 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 BLOC1S4Q9NUP1 217 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 IPPQ9Y573 584 aa13.9□□□□□ -0.18
SMARCE1-218ENST00000582955 CNTNAP2Q9UHC6 1331 aa13.9□□□□□ -0.19
SMARCE1-218ENST00000582955 TRANK1O15050 2925 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 A0A1B0GUA9 196 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 K7ERI5 159 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 ACKR2O00590 384 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 N4BP3O15049 544 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 PPP6R2O75170 966 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 ITGB1P05556 798 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 NCLP19338 710 aaKnown RBP13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 RNASELQ05823 741 aaKnown RBP13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 NAALADL2Q58DX5 795 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 ARSHQ5FYA8 562 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 NOMO2Q5JPE7 1267 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 RRAGBQ5VZM2 374 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 AGMOQ6ZNB7 445 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 THNSL1Q8IYQ7 743 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 SMG8Q8ND04 991 aaKnown RBP13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 SLC17A8Q8NDX2 589 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 URGCPQ8TCY9 931 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 RSPH1Q8WYR4 309 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 LMAN2LQ9H0V9 348 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms