RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 INO80BQ9C086 356 aaPredicted RBP13.18□□□□□ -0.3
CCDC57-216ENST00000582885 FZD8Q9H461 694 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 PRMT7Q9NVM4 692 aaPredicted RBP13.18□□□□□ -0.3
CCDC57-216ENST00000582885 NFE2L3Q9Y4A8 694 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 TRIM49BA6NDI0 452 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 ACKR2O00590 384 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 CRYBB1P53674 252 aaPredicted RBP13.17□□□□□ -0.3
CCDC57-216ENST00000582885 STX17P56962 302 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 MRPS6P82932 125 aaKnown RBP13.17□□□□□ -0.3
CCDC57-216ENST00000582885 MBTD1Q05BQ5 628 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 RBL2Q08999 1139 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 FAM26DQ5JW98 314 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 CDKAL1Q5VV42 579 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 FAM126BQ8IXS8 530 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 CSGALNACT2Q8N6G5 542 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 RNF214Q8ND24 703 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 NLRP7Q8WX94 980 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 CEP63Q96MT8 703 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 CELF4Q9BZC1 486 aaKnown RBP13.17□□□□□ -0.3
CCDC57-216ENST00000582885 HSD3B7Q9H2F3 369 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 THAP9Q9H5L6 903 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 STYXL1Q9Y6J8 313 aa13.17□□□□□ -0.3
CCDC57-216ENST00000582885 PDCD11Q14690 1871 aaKnown RBP13.16□□□□□ -0.3
CCDC57-216ENST00000582885 RALGAPA2Q2PPJ7 1873 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 ALPK3Q96L96 1907 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 M0QZ92 97 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 KIAA0391O15091 583 aaKnown RBP13.16□□□□□ -0.3
CCDC57-216ENST00000582885 B4GALT4O60513 344 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 CD4P01730 458 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 PRKCBP05771 671 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 DARSP14868 501 aaKnown RBP13.16□□□□□ -0.3
CCDC57-216ENST00000582885 ZNF18P17022 549 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 GARTP22102 1010 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 EIF4BP23588 611 aaKnown RBP13.16□□□□□ -0.3
CCDC57-216ENST00000582885 HSP90AA2PQ14568 343 aaPredicted RBP13.16□□□□□ -0.3
CCDC57-216ENST00000582885 TPD52L1Q16890 204 aaPredicted RBP13.16□□□□□ -0.3
CCDC57-216ENST00000582885 TRIM71Q2Q1W2 868 aaKnown RBP13.16□□□□□ -0.3
CCDC57-216ENST00000582885 SLFN12LQ6IEE8 588 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 SLC39A5Q6ZMH5 540 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 LRRC55Q6ZSA7 311 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 ANKRD33Q7Z3H0 272 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 TOX2Q96NM4 488 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 MRPL4Q9BYD3 311 aaKnown RBP13.16□□□□□ -0.3
CCDC57-216ENST00000582885 SENP6Q9GZR1 1112 aaPredicted RBP13.16□□□□□ -0.3
CCDC57-216ENST00000582885 MINDY3Q9H8M7 445 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 GRPEL1Q9HAV7 217 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 AGPAT3Q9NRZ7 376 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 TRMT13Q9NUP7 481 aaKnown RBP13.16□□□□□ -0.3
CCDC57-216ENST00000582885 FANCLQ9NW38 375 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 DMAC2Q9NW81 257 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 NOD1Q9Y239 953 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 TRPV2Q9Y5S1 764 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 SQORQ9Y6N5 450 aa13.16□□□□□ -0.3
CCDC57-216ENST00000582885 CNTNAP2Q9UHC6 1331 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 INO80B-WBP1J3KQ70 363 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 HNRNPDLO14979 420 aaKnown RBP13.15□□□□□ -0.3
CCDC57-216ENST00000582885 CETN3O15182 167 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 TLR3O15455 904 aaKnown RBP13.15□□□□□ -0.3
CCDC57-216ENST00000582885 GNA14O95837 355 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 NR3C1P04150 777 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 NR2F2P24468 414 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 MRE11P49959 708 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 SPAG1Q07617 926 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 MGAT3Q09327 533 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 ADAM9Q13443 819 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 KIZQ2M2Z5 673 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 TSHZ1Q6ZSZ6 1077 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 FAM43BQ6ZT52 329 aaPredicted RBP13.15□□□□□ -0.3
CCDC57-216ENST00000582885 FILIP1Q7Z7B0 1213 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 IRF2BP1Q8IU81 584 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 FAM114A1Q8IWE2 563 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 CCDC155Q8N6L0 562 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 CAGE1Q8TC20 777 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 DHX38Q92620 1227 aaKnown RBP13.15□□□□□ -0.3
CCDC57-216ENST00000582885 WNT8BQ93098 351 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 SCLT1Q96NL6 688 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 ACO2Q99798 780 aaKnown RBP13.15□□□□□ -0.3
CCDC57-216ENST00000582885 MKNK1Q9BUB5 465 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 SRRTQ9BXP5 876 aaKnown RBP13.15□□□□□ -0.3
CCDC57-216ENST00000582885 TRPV6Q9H1D0 765 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 CDHR5Q9HBB8 845 aa13.15□□□□□ -0.3
CCDC57-216ENST00000582885 SCN5AQ14524 2016 aa13.14□□□□□ -0.31
CCDC57-216ENST00000582885 ANKRD63C9JTQ0 380 aa13.14□□□□□ -0.31
CCDC57-216ENST00000582885 MAPK13O15264 365 aa13.14□□□□□ -0.31
CCDC57-216ENST00000582885 TOM1L1O75674 476 aa13.14□□□□□ -0.31
CCDC57-216ENST00000582885 IQCF3P0C7M6 154 aa13.14□□□□□ -0.31
CCDC57-216ENST00000582885 EEF1GP26641 437 aaKnown RBP13.14□□□□□ -0.31
CCDC57-216ENST00000582885 AXLP30530 894 aa13.14□□□□□ -0.31
CCDC57-216ENST00000582885 LIG4P49917 911 aa13.14□□□□□ -0.31
CCDC57-216ENST00000582885 MARSP56192 900 aaKnown RBP13.14□□□□□ -0.31
CCDC57-216ENST00000582885 TMEM62Q0P6H9 643 aa13.14□□□□□ -0.31
CCDC57-216ENST00000582885 PRPF4BQ13523 1007 aaKnown RBP13.14□□□□□ -0.31
CCDC57-216ENST00000582885 AMHR2Q16671 573 aa13.14□□□□□ -0.31
CCDC57-216ENST00000582885 SLC39A4Q6P5W5 647 aa13.14□□□□□ -0.31
CCDC57-216ENST00000582885 USP38Q8NB14 1042 aa13.14□□□□□ -0.31
CCDC57-216ENST00000582885 BICD1Q96G01 975 aa13.14□□□□□ -0.31
CCDC57-216ENST00000582885 OSMRQ99650 979 aa13.14□□□□□ -0.31
CCDC57-216ENST00000582885 TARS2Q9BW92 718 aaKnown RBP13.14□□□□□ -0.31
CCDC57-216ENST00000582885 C11orf49Q9H6J7 331 aa13.14□□□□□ -0.31
CCDC57-216ENST00000582885 SAMSN1Q9NSI8 373 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms