RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 ZNF572Q7Z3I7 529 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 CCDC60Q8IWA6 550 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 TAS1R2Q8TE23 839 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 TMEM143Q96AN5 459 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 DENND3A2RUS2 1198 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 ZNF233A6NK53 670 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 KRIT1O00522 736 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 WDR46O15213 610 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 CLSTN1O94985 981 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 FGGP02679 453 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 CFHP08603 1231 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 HARSP12081 509 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 PLS3P13797 630 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 ECHS1P30084 290 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 PRKCIP41743 596 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 ZDHHC14Q8IZN3 488 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 AFAP1L1Q8TED9 768 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 ZBTB45Q96K62 511 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 RIT2Q99578 217 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 SYT11Q9BT88 431 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 STK33Q9BYT3 514 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 POLR2AP24928 1970 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TTLL13PA6NNM8 815 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 FTLP02792 175 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 EDN1P05305 212 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 CHRNB2P17787 502 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TNFAIP3P21580 790 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 AARSP49588 968 aaKnown RBP eCLIP11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MTERF2Q49AM1 385 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MAP9Q49MG5 647 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TMEM63BQ5T3F8 832 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 UHMK1Q8TAS1 419 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 EXOC4Q96A65 974 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 RPGRIP1Q96KN7 1286 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 CEP170P1Q96L14 293 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 FAM118BQ9BPY3 351 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 KIAA1683Q9H0B3 1180 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 EHMT1Q9H9B1 1298 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SEPT9Q9UHD8 586 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ODF2LQ9ULJ1 636 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 STXBP5LQ9Y2K9 1186 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ZNFX1Q9P2E3 1918 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 GOLGA6CA6NDK9 693 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SART1O43290 800 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 GJB6O95452 261 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 NR3C2P08235 984 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 GOLGA6DP0CG33 693 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 NF2P35240 595 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 GPS2Q13227 327 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PDCLQ13371 301 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MESDQ14696 234 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MCTP2Q6DN12 878 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MOB2Q70IA6 237 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 FAM213AQ9BRX8 229 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 GDF3Q9NR23 364 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 GOLGA6AQ9NYA3 693 aa11.58□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PTPRJQ12913 1337 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 DDX3YO15523 660 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PPP1R12BO60237 982 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 KRT13P13646 458 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 FERP16591 822 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PTPRAP18433 802 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ACOT2P49753 483 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 DRP2Q13474 957 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SNRNP35Q16560 246 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TAS1R3Q7RTX0 852 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PLCD3Q8N3E9 789 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 XXYLT1Q8NBI6 393 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TMEM161BQ8NDZ6 487 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 AGPAT1Q99943 283 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 GGA3Q9NZ52 723 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 LARSQ9P2J5 1176 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 RSPH14Q9UHP6 348 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 DCDC2CA8MYV0 355 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 O00370 1275 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 HIRAP54198 1017 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 R3HDM1Q15032 1099 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 UAP1Q16222 522 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TREML2Q5T2D2 321 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 CCDC70Q6NSX1 233 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SEPT14Q6ZU15 432 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MTMR14Q8NCE2 650 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 POMGNT1Q8WZA1 660 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ACCSQ96QU6 501 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 HAPLN2Q9GZV7 340 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 A1CFQ9NQ94 594 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 XPNPEP1Q9NQW7 623 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TBX20Q9UMR3 447 aa11.57□□□□□ -0.56
CDK5RAP3-225ENST00000582482 CNGA1P29973 690 aa11.56□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MXI1P50539 228 aa11.56□□□□□ -0.56
CDK5RAP3-225ENST00000582482 EPHB4P54760 987 aa11.56□□□□□ -0.56
CDK5RAP3-225ENST00000582482 BACE1P56817 501 aa11.56□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MAP3K10Q02779 954 aa11.56□□□□□ -0.56
CDK5RAP3-225ENST00000582482 DHX9Q08211 1270 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-225ENST00000582482 WDR81Q562E7 1941 aa11.56□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PASD1Q8IV76 773 aa11.56□□□□□ -0.56
CDK5RAP3-225ENST00000582482 CTNNBL1Q8WYA6 563 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-225ENST00000582482 C18orf8Q96DM3 657 aa11.56□□□□□ -0.56
CDK5RAP3-225ENST00000582482 CTTNBP2NLQ9P2B4 639 aa11.56□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ZNF214Q9UL59 606 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms