RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 CUL4BQ13620 913 aa22.08■■□□□ 1.13
TOP3A-213ENST00000582230 AMHR2Q16671 573 aa22.08■■□□□ 1.13
TOP3A-213ENST00000582230 UNC13DQ70J99 1090 aa22.08■■□□□ 1.13
TOP3A-213ENST00000582230 SLC24A5Q71RS6 500 aa22.08■■□□□ 1.13
TOP3A-213ENST00000582230 HAUS6Q7Z4H7 955 aa22.08■■□□□ 1.13
TOP3A-213ENST00000582230 RTN4RL1Q86UN2 441 aaPredicted RBP22.08■■□□□ 1.13
TOP3A-213ENST00000582230 SFR1Q86XK3 245 aa22.08■■□□□ 1.13
TOP3A-213ENST00000582230 GRAMD1CQ8IYS0 662 aa22.08■■□□□ 1.13
TOP3A-213ENST00000582230 PHOSPHO2Q8TCD6 241 aa22.08■■□□□ 1.13
TOP3A-213ENST00000582230 BLZF1Q9H2G9 400 aa22.08■■□□□ 1.13
TOP3A-213ENST00000582230 ST6GALNAC4Q9H4F1 302 aa22.08■■□□□ 1.13
TOP3A-213ENST00000582230 RNF216Q9NWF9 866 aaPredicted RBP22.08■■□□□ 1.13
TOP3A-213ENST00000582230 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.07■■□□□ 1.12
TOP3A-213ENST00000582230 HOXA11P31270 313 aaPredicted RBP22.07■■□□□ 1.12
TOP3A-213ENST00000582230 STRN3Q13033 797 aa22.07■■□□□ 1.12
TOP3A-213ENST00000582230 PRPF4BQ13523 1007 aaKnown RBP22.07■■□□□ 1.12
TOP3A-213ENST00000582230 ELOA2Q8IYF1 753 aaPredicted RBP22.07■■□□□ 1.12
TOP3A-213ENST00000582230 CCDC51Q96ER9 411 aa22.07■■□□□ 1.12
TOP3A-213ENST00000582230 SLC9A7Q96T83 725 aa22.07■■□□□ 1.12
TOP3A-213ENST00000582230 TRAIPQ9BWF2 469 aa22.07■■□□□ 1.12
TOP3A-213ENST00000582230 LMBRD1Q9NUN5 540 aa22.07■■□□□ 1.12
TOP3A-213ENST00000582230 K7ENM7 598 aa22.06■■□□□ 1.12
TOP3A-213ENST00000582230 MGEA5O60502 916 aa22.06■■□□□ 1.12
TOP3A-213ENST00000582230 ARF4P18085 180 aaPredicted RBP22.06■■□□□ 1.12
TOP3A-213ENST00000582230 COASYQ13057 564 aa22.06■■□□□ 1.12
TOP3A-213ENST00000582230 NOTUMQ6P988 496 aa22.06■■□□□ 1.12
TOP3A-213ENST00000582230 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.06■■□□□ 1.12
TOP3A-213ENST00000582230 ZNF720Q7Z2F6 126 aa22.06■■□□□ 1.12
TOP3A-213ENST00000582230 LINC01599Q8WXQ3 324 aa22.06■■□□□ 1.12
TOP3A-213ENST00000582230 FIZ1Q96SL8 496 aa22.06■■□□□ 1.12
TOP3A-213ENST00000582230 MRPL44Q9H9J2 332 aaKnown RBP22.06■■□□□ 1.12
TOP3A-213ENST00000582230 CNTNAP2Q9UHC6 1331 aa22.06■■□□□ 1.12
TOP3A-213ENST00000582230 A0A1B0GUA9 196 aa22.05■■□□□ 1.12
TOP3A-213ENST00000582230 RBAK-RBAKDNI3L0D1 243 aa22.05■■□□□ 1.12
TOP3A-213ENST00000582230 SKIP12755 728 aa22.05■■□□□ 1.12
TOP3A-213ENST00000582230 ATP2A2P16615 1042 aaKnown RBP22.05■■□□□ 1.12
TOP3A-213ENST00000582230 CASP1P29466 404 aa22.05■■□□□ 1.12
TOP3A-213ENST00000582230 FAM189BP81408 668 aa22.05■■□□□ 1.12
TOP3A-213ENST00000582230 GTF2BQ00403 316 aa22.05■■□□□ 1.12
TOP3A-213ENST00000582230 ALCAMQ13740 583 aa22.05■■□□□ 1.12
TOP3A-213ENST00000582230 POSTNQ15063 836 aa22.05■■□□□ 1.12
TOP3A-213ENST00000582230 TWF2Q6IBS0 349 aaKnown RBP22.05■■□□□ 1.12
TOP3A-213ENST00000582230 HVCN1Q96D96 273 aa22.05■■□□□ 1.12
TOP3A-213ENST00000582230 MRPL4Q9BYD3 311 aaKnown RBP22.05■■□□□ 1.12
TOP3A-213ENST00000582230 A0A0U1RQF3 1178 aa22.04■■□□□ 1.12
TOP3A-213ENST00000582230 C9IYK1 514 aa22.04■■□□□ 1.12
TOP3A-213ENST00000582230 B4GALT5O43286 388 aa22.04■■□□□ 1.12
TOP3A-213ENST00000582230 NMT1P30419 496 aaKnown RBP22.04■■□□□ 1.12
TOP3A-213ENST00000582230 SARSP49591 514 aaKnown RBP22.04■■□□□ 1.12
TOP3A-213ENST00000582230 RAB27AP51159 221 aa22.04■■□□□ 1.12
TOP3A-213ENST00000582230 DEFB103AP81534 67 aa22.04■■□□□ 1.12
TOP3A-213ENST00000582230 DPYDQ12882 1025 aa22.04■■□□□ 1.12
TOP3A-213ENST00000582230 TMEM132AQ24JP5 1023 aa22.04■■□□□ 1.12
TOP3A-213ENST00000582230 STXBP4Q6ZWJ1 553 aa22.04■■□□□ 1.12
TOP3A-213ENST00000582230 TAS1R3Q7RTX0 852 aa22.04■■□□□ 1.12
TOP3A-213ENST00000582230 TOP1MTQ969P6 601 aa22.04■■□□□ 1.12
TOP3A-213ENST00000582230 CCDC47Q96A33 483 aaKnown RBP22.04■■□□□ 1.12
TOP3A-213ENST00000582230 CPB2Q96IY4 423 aa22.04■■□□□ 1.12
TOP3A-213ENST00000582230 TBX20Q9UMR3 447 aa22.04■■□□□ 1.12
TOP3A-213ENST00000582230 PCDHB13Q9Y5F0 798 aa22.04■■□□□ 1.12
TOP3A-213ENST00000582230 TET1Q8NFU7 2136 aa22.04■■□□□ 1.12
TOP3A-213ENST00000582230 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.03■■□□□ 1.12
TOP3A-213ENST00000582230 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.03■■□□□ 1.12
TOP3A-213ENST00000582230 N4BP3O15049 544 aa22.03■■□□□ 1.12
TOP3A-213ENST00000582230 RPN1P04843 607 aaKnown RBP22.03■■□□□ 1.12
TOP3A-213ENST00000582230 STAG3L1P0CL83 205 aa22.03■■□□□ 1.12
TOP3A-213ENST00000582230 EHHADHQ08426 723 aa22.03■■□□□ 1.12
TOP3A-213ENST00000582230 MYOCDQ8IZQ8 938 aa22.03■■□□□ 1.12
TOP3A-213ENST00000582230 ELAC1Q9H777 363 aaKnown RBP22.03■■□□□ 1.12
TOP3A-213ENST00000582230 EXOC1Q9NV70 894 aa22.03■■□□□ 1.12
TOP3A-213ENST00000582230 TBC1D7Q9P0N9 293 aa22.03■■□□□ 1.12
TOP3A-213ENST00000582230 KLRC4O43908 158 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 ZNF623O75123 536 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 GCNT3O95395 438 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 PSMD2Q13200 908 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 FAM26FQ5R3K3 315 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 NT5DC1Q5TFE4 455 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 ATF7IP2Q5U623 682 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 SLC27A1Q6PCB7 646 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 ZPBP2Q6X784 338 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 APBB1IPQ7Z5R6 666 aaPredicted RBP22.02■■□□□ 1.12
TOP3A-213ENST00000582230 NPAS4Q8IUM7 802 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 HERC6Q8IVU3 1022 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 ADPGKQ9BRR6 497 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 STRA6Q9BX79 667 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 FAM105AQ9NUU6 356 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 TMEM161AQ9NX61 479 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 LRFN2Q9ULH4 789 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 TNFSF13BQ9Y275 285 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 PCDHB7Q9Y5E2 793 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 CEP290O15078 2479 aa22.02■■□□□ 1.12
TOP3A-213ENST00000582230 PPP1R37O75864 691 aa22.01■■□□□ 1.11
TOP3A-213ENST00000582230 SMC2O95347 1197 aa22.01■■□□□ 1.11
TOP3A-213ENST00000582230 EOMESO95936 686 aa22.01■■□□□ 1.11
TOP3A-213ENST00000582230 PRR29P0C7W0 189 aa22.01■■□□□ 1.11
TOP3A-213ENST00000582230 LRIT3Q3SXY7 679 aa22.01■■□□□ 1.11
TOP3A-213ENST00000582230 KMT5BQ4FZB7 885 aa22.01■■□□□ 1.11
TOP3A-213ENST00000582230 ZC2HC1CQ53FD0 456 aaPredicted RBP22.01■■□□□ 1.11
TOP3A-213ENST00000582230 ECHDC2Q86YB7 292 aa22.01■■□□□ 1.11
TOP3A-213ENST00000582230 MAP4K3Q8IVH8 894 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms