RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 KRT17Q04695 432 aa21.6■■□□□ 1.05
SREBF1-220ENST00000581707 AMHR2Q16671 573 aa21.6■■□□□ 1.05
SREBF1-220ENST00000581707 BRAPQ7Z569 592 aa21.6■■□□□ 1.05
SREBF1-220ENST00000581707 CNNM3Q8NE01 707 aa21.6■■□□□ 1.05
SREBF1-220ENST00000581707 IGFLR1Q9H665 355 aa21.6■■□□□ 1.05
SREBF1-220ENST00000581707 VPS37CA5D8V6 355 aaPredicted RBP21.59■■□□□ 1.05
SREBF1-220ENST00000581707 ARF4P18085 180 aaPredicted RBP21.59■■□□□ 1.05
SREBF1-220ENST00000581707 NCLP19338 710 aaKnown RBP21.59■■□□□ 1.05
SREBF1-220ENST00000581707 GTF2F1P35269 517 aaKnown RBP eCLIP21.59■■□□□ 1.05
SREBF1-220ENST00000581707 ALDH7A1P49419 539 aaKnown RBP21.59■■□□□ 1.05
SREBF1-220ENST00000581707 BCAR1P56945 870 aa21.59■■□□□ 1.05
SREBF1-220ENST00000581707 ERVFC1P60507 584 aa21.59■■□□□ 1.05
SREBF1-220ENST00000581707 RNASELQ05823 741 aaKnown RBP21.59■■□□□ 1.05
SREBF1-220ENST00000581707 CTC1Q2NKJ3 1217 aa21.59■■□□□ 1.05
SREBF1-220ENST00000581707 ARL6IP4Q66PJ3 421 aaKnown RBP21.59■■□□□ 1.05
SREBF1-220ENST00000581707 ZBTB8OSQ8IWT0 167 aa21.59■■□□□ 1.05
SREBF1-220ENST00000581707 MRPS27Q92552 414 aaKnown RBP21.59■■□□□ 1.05
SREBF1-220ENST00000581707 MMTAG2Q9BU76 263 aaKnown RBP21.59■■□□□ 1.05
SREBF1-220ENST00000581707 EIF2AQ9BY44 585 aaKnown RBP21.59■■□□□ 1.05
SREBF1-220ENST00000581707 CSRNP2Q9H175 543 aa21.59■■□□□ 1.05
SREBF1-220ENST00000581707 TBC1D13Q9NVG8 400 aa21.59■■□□□ 1.05
SREBF1-220ENST00000581707 CNTNAP2Q9UHC6 1331 aa21.58■■□□□ 1.05
SREBF1-220ENST00000581707 VWA3AA6NCI4 1184 aa21.58■■□□□ 1.05
SREBF1-220ENST00000581707 H3BQ06 376 aaPredicted RBP21.58■■□□□ 1.05
SREBF1-220ENST00000581707 EYA4O95677 639 aa21.58■■□□□ 1.05
SREBF1-220ENST00000581707 CDCA2Q69YH5 1023 aaPredicted RBP21.58■■□□□ 1.05
SREBF1-220ENST00000581707 PDE12Q6L8Q7 609 aaKnown RBP21.58■■□□□ 1.05
SREBF1-220ENST00000581707 ADGRD2Q7Z7M1 963 aa21.58■■□□□ 1.05
SREBF1-220ENST00000581707 SMG8Q8ND04 991 aaKnown RBP21.58■■□□□ 1.05
SREBF1-220ENST00000581707 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.58■■□□□ 1.05
SREBF1-220ENST00000581707 URGCPQ8TCY9 931 aa21.58■■□□□ 1.05
SREBF1-220ENST00000581707 BSNDQ8WZ55 320 aa21.58■■□□□ 1.05
SREBF1-220ENST00000581707 INTS4Q96HW7 963 aaKnown RBP21.58■■□□□ 1.05
SREBF1-220ENST00000581707 NECAB3Q96P71 396 aaPredicted RBP21.58■■□□□ 1.05
SREBF1-220ENST00000581707 RSAD1Q9HA92 442 aa21.58■■□□□ 1.05
SREBF1-220ENST00000581707 POLD4Q9HCU8 107 aa21.58■■□□□ 1.05
SREBF1-220ENST00000581707 UBN1Q9NPG3 1134 aa21.58■■□□□ 1.05
SREBF1-220ENST00000581707 IPPQ9Y573 584 aa21.58■■□□□ 1.05
SREBF1-220ENST00000581707 PCDHGC5Q9Y5F6 944 aa21.58■■□□□ 1.05
SREBF1-220ENST00000581707 E9PMD0 336 aa21.57■■□□□ 1.04
SREBF1-220ENST00000581707 TNFRSF10AO00220 468 aa21.57■■□□□ 1.04
SREBF1-220ENST00000581707 B4GALT5O43286 388 aa21.57■■□□□ 1.04
SREBF1-220ENST00000581707 ZC3H11AO75152 810 aaKnown RBP eCLIP21.57■■□□□ 1.04
SREBF1-220ENST00000581707 ITGA4P13612 1032 aa21.57■■□□□ 1.04
SREBF1-220ENST00000581707 LTBRP36941 435 aa21.57■■□□□ 1.04
SREBF1-220ENST00000581707 NAMPTP43490 491 aa21.57■■□□□ 1.04
SREBF1-220ENST00000581707 PPP2R5AQ15172 486 aa21.57■■□□□ 1.04
SREBF1-220ENST00000581707 ZRSR1Q15695 479 aaKnown RBP21.57■■□□□ 1.04
SREBF1-220ENST00000581707 RBM23Q86U06 439 aaKnown RBP21.57■■□□□ 1.04
SREBF1-220ENST00000581707 SLC39A11Q8N1S5 342 aa21.57■■□□□ 1.04
SREBF1-220ENST00000581707 KIFAP3Q92845 792 aa21.57■■□□□ 1.04
SREBF1-220ENST00000581707 IFT74Q96LB3 600 aa21.57■■□□□ 1.04
SREBF1-220ENST00000581707 C2orf40Q9H1Z8 148 aa21.57■■□□□ 1.04
SREBF1-220ENST00000581707 FZD8Q9H461 694 aa21.57■■□□□ 1.04
SREBF1-220ENST00000581707 NRDE2Q9H7Z3 1164 aa21.57■■□□□ 1.04
SREBF1-220ENST00000581707 PRMT7Q9NVM4 692 aaPredicted RBP21.57■■□□□ 1.04
SREBF1-220ENST00000581707 MUC3AQ02505 3323 aa21.57■■□□□ 1.04
SREBF1-220ENST00000581707 CARNS1A5YM72 827 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 NT5C1B-RDH14C9J2C7 533 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 K7ELQ4 463 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-220ENST00000581707 FSCN2O14926 492 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 NRIP1P48552 1158 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 ADAM15Q13444 863 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 FAM187BQ17R55 369 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 PUS10Q3MIT2 529 aaKnown RBP21.56■■□□□ 1.04
SREBF1-220ENST00000581707 PTCRAQ6ISU1 281 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-220ENST00000581707 PPP4R3CPQ6ZMV5 832 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 EFHBQ8N7U6 833 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 DEPTORQ8TB45 409 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 PRIMPOLQ96LW4 560 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 TRIM6Q9C030 488 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-220ENST00000581707 GBP3Q9H0R5 595 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 RNF39Q9H2S5 420 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 TLE6Q9H808 572 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 KANSL3Q9P2N6 904 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 HES2Q9Y543 173 aa21.56■■□□□ 1.04
SREBF1-220ENST00000581707 A0A1B0GUA9 196 aa21.55■■□□□ 1.04
SREBF1-220ENST00000581707 LINC01565O15544 149 aa21.55■■□□□ 1.04
SREBF1-220ENST00000581707 BMP15O95972 392 aa21.55■■□□□ 1.04
SREBF1-220ENST00000581707 SYT1P21579 422 aa21.55■■□□□ 1.04
SREBF1-220ENST00000581707 AFF1P51825 1210 aaKnown RBP21.55■■□□□ 1.04
SREBF1-220ENST00000581707 MAPK6Q16659 721 aa21.55■■□□□ 1.04
SREBF1-220ENST00000581707 HYIQ5T013 277 aa21.55■■□□□ 1.04
SREBF1-220ENST00000581707 PLPP4Q5VZY2 271 aa21.55■■□□□ 1.04
SREBF1-220ENST00000581707 SLC27A1Q6PCB7 646 aa21.55■■□□□ 1.04
SREBF1-220ENST00000581707 KCNK18Q7Z418 384 aa21.55■■□□□ 1.04
SREBF1-220ENST00000581707 CDR2LQ86X02 465 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-220ENST00000581707 TCF25Q9BQ70 676 aa21.55■■□□□ 1.04
SREBF1-220ENST00000581707 NGRNQ9NPE2 291 aaKnown RBP21.55■■□□□ 1.04
SREBF1-220ENST00000581707 ENTPD7Q9NQZ7 604 aa21.55■■□□□ 1.04
SREBF1-220ENST00000581707 GRXCR2A6NFK2 248 aa21.54■■□□□ 1.04
SREBF1-220ENST00000581707 PER2O15055 1255 aa21.54■■□□□ 1.04
SREBF1-220ENST00000581707 NPTXRO95502 500 aa21.54■■□□□ 1.04
SREBF1-220ENST00000581707 GALTP07902 379 aa21.54■■□□□ 1.04
SREBF1-220ENST00000581707 DLX2Q07687 328 aaPredicted RBP21.54■■□□□ 1.04
SREBF1-220ENST00000581707 TMC7Q7Z402 723 aa21.54■■□□□ 1.04
SREBF1-220ENST00000581707 ZNF280BQ86YH2 543 aa21.54■■□□□ 1.04
SREBF1-220ENST00000581707 HACE1Q8IYU2 909 aa21.54■■□□□ 1.04
SREBF1-220ENST00000581707 KCTD17Q8N5Z5 321 aa21.54■■□□□ 1.04
SREBF1-220ENST00000581707 TMEM169Q96HH4 297 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms