RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 DPP9Q86TI2 863 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 EHD2Q9NZN4 543 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 LIMA1Q9UHB6 759 aaKnown RBP15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 PYGLP06737 847 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 FOXD4Q12950 439 aaPredicted RBP15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 ZNF711Q9Y462 761 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 CEP170Q5SW79 1584 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 LOC102724159A0A0B4J2E5 919 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 ZBTB5O15062 677 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 SERPINB4P48594 390 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 ALDH18A1P54886 795 aaKnown RBP15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 TAP1Q03518 808 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 AP1B1Q10567 949 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 GRM4Q14833 912 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 PWP2Q15269 919 aaKnown RBP15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 DAB2IPQ5VWQ8 1189 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 SHC4Q6S5L8 630 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 C11orf70Q9BRQ4 267 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 CHCHD3Q9NX63 227 aaKnown RBP15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 USP6P35125 1406 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 USP17L5A8MUK1 530 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 GNA15P30679 374 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 BYSLQ13895 437 aaKnown RBP15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 TRIM72Q6ZMU5 477 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 NDUFAF2Q8N183 169 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 PBXIP1Q96AQ6 731 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 IL17RAQ96F46 866 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 ZNF185O15231 689 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 SLC27A3Q5K4L6 730 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 CCNYL1Q8N7R7 359 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 C1orf54Q8WWF1 131 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 SMG5Q9UPR3 1016 aaKnown RBP15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 PHF2O75151 1096 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 ENO1P06733 434 aaKnown RBP15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 CC2D2BQ6DHV5 1058 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 DSTYKQ6XUX3 929 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 TMCO5AQ8N6Q1 288 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 PSD3Q9NYI0 1048 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 LRFN2Q9ULH4 789 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 PADI6Q6TGC4 694 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 FRMD5Q7Z6J6 570 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 PPP1R16BQ96T49 567 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 MAGEB5Q9BZ81 275 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 ASPSCR1Q9BZE9 553 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 TRABDQ9H4I3 376 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 ZDHHC9Q9Y397 364 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 GTPBP10A4D1E9 387 aaKnown RBP15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 CCND1P24385 295 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 DNAL1Q4LDG9 190 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 SH3RF3Q8TEJ3 882 aaPredicted RBP15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 DONSONQ9NYP3 566 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 ZNF212Q9UDV6 495 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 KIF28PB7ZC32 967 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 KIAA1755Q5JYT7 1200 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 HEATR6Q6AI08 1181 aaKnown RBP15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 SEC16BQ96JE7 1060 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 CCT8L2Q96SF2 557 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 ASAP1Q9ULH1 1129 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 ZNF189O75820 626 aaPredicted RBP15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 TMCC1O94876 653 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 APBA3O96018 575 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 SLC1A1P43005 524 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 DAB2P98082 770 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 KCNA1Q09470 495 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 DACH2Q96NX9 599 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 USP21Q9UK80 565 aa15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 USP15Q9Y4E8 981 aaPredicted RBP15.42■□□□□ 0.06
CSNK1D-217ENST00000581241 CDC27P30260 824 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 ARPP19P56211 112 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 TMEM154Q6P9G4 183 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 ENOSF1Q7L5Y1 443 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 AGPAT1Q99943 283 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 EDEM3Q9BZQ6 932 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 PARVAQ9NVD7 372 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 M0QYV0 167 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 RTN2O75298 545 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 INPP5AQ14642 412 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 KCNB1Q14721 858 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 MTF1Q14872 753 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 RASGRP2Q7LDG7 609 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 RNPC3Q96LT9 517 aaKnown RBP15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 FAM213AQ9BRX8 229 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 BSDC1Q9NW68 430 aaPredicted RBP15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 ZNF229Q9UJW7 825 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 ZBTB1Q9Y2K1 713 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 H7C1W4 665 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 ARSEP51690 589 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 TXNRD1Q16881 649 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 SEL1LQ9UBV2 794 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 AMACRQ9UHK6 382 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 ESRRBO95718 433 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 APOA1P02647 267 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 ELF1P32519 619 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 CNGA3Q16281 694 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 ZNF394Q53GI3 561 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 ITPRIPL1Q6GPH6 555 aa15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 GUF1Q8N442 669 aaKnown RBP15.41■□□□□ 0.06
CSNK1D-217ENST00000581241 REREQ9P2R6 1566 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms