RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 RNASELQ05823 741 aaKnown RBP23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 POU5F1BQ06416 359 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 KCNC3Q14003 757 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 TFDP1Q14186 410 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 TTC38Q5R3I4 469 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 ZNF280BQ86YH2 543 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 TMEM169Q96HH4 297 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 GBP3Q9H0R5 595 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 TUFT1Q9NNX1 390 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 DNAJB4Q9UDY4 337 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 USO1O60763 962 aaKnown RBP23.66■■□□□ 1.38
CSNK1D-216ENST00000581108 GALTP07902 379 aa23.66■■□□□ 1.38
CSNK1D-216ENST00000581108 ORC2Q13416 577 aaPredicted RBP23.66■■□□□ 1.38
CSNK1D-216ENST00000581108 TMEM31Q5JXX7 168 aa23.66■■□□□ 1.38
CSNK1D-216ENST00000581108 LLGL2Q6P1M3 1020 aa23.66■■□□□ 1.38
CSNK1D-216ENST00000581108 MAEAQ7L5Y9 396 aa23.66■■□□□ 1.38
CSNK1D-216ENST00000581108 IFNLR1Q8IU57 520 aaPredicted RBP23.66■■□□□ 1.38
CSNK1D-216ENST00000581108 MRPL43Q8N983 215 aaKnown RBP23.66■■□□□ 1.38
CSNK1D-216ENST00000581108 SMG8Q8ND04 991 aaKnown RBP23.66■■□□□ 1.38
CSNK1D-216ENST00000581108 CPB2Q96IY4 423 aa23.66■■□□□ 1.38
CSNK1D-216ENST00000581108 POLR3CQ9BUI4 534 aaPredicted RBP23.66■■□□□ 1.38
CSNK1D-216ENST00000581108 RSAD1Q9HA92 442 aa23.66■■□□□ 1.38
CSNK1D-216ENST00000581108 USP15Q9Y4E8 981 aaPredicted RBP23.66■■□□□ 1.38
CSNK1D-216ENST00000581108 FSD2A1L4K1 749 aa23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 C2orf71A6NGG8 1288 aa23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 B4GALT3O60512 393 aa23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 GPR37L1O60883 481 aa23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 NCLP19338 710 aaKnown RBP23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 MBTD1Q05BQ5 628 aa23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 NBR1Q14596 966 aa23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 SMC1AQ14683 1233 aaKnown RBP23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 PCBP1Q15365 356 aaKnown RBP eCLIP23.65■■□□□ 1.383e-6■■□□□ 12.1
CSNK1D-216ENST00000581108 TMEM184AQ6ZMB5 413 aa23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 C4orf32Q8N8J7 132 aa23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 URGCPQ8TCY9 931 aa23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 BCL7CQ8WUZ0 217 aaPredicted RBP23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 IGSF21Q96ID5 467 aa23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 NACC1Q96RE7 527 aa23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 EIF2AQ9BY44 585 aaKnown RBP23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 POLR3FQ9H1D9 316 aaPredicted RBP23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 GPRC5CQ9NQ84 441 aa23.65■■□□□ 1.38
CSNK1D-216ENST00000581108 DDHD2O94830 711 aa23.64■■□□□ 1.37
CSNK1D-216ENST00000581108 CXCL14O95715 111 aa23.64■■□□□ 1.37
CSNK1D-216ENST00000581108 ALADP13716 330 aa23.64■■□□□ 1.37
CSNK1D-216ENST00000581108 U2AF2P26368 475 aaKnown RBP eCLIP23.64■■□□□ 1.377e-9■□□□□ 10.4
CSNK1D-216ENST00000581108 AXLP30530 894 aa23.64■■□□□ 1.37
CSNK1D-216ENST00000581108 SLC11A1P49279 550 aa23.64■■□□□ 1.37
CSNK1D-216ENST00000581108 NCBP1Q09161 790 aaKnown RBP23.64■■□□□ 1.37
CSNK1D-216ENST00000581108 RABEP1Q15276 862 aa23.64■■□□□ 1.37
CSNK1D-216ENST00000581108 AMHR2Q16671 573 aa23.64■■□□□ 1.37
CSNK1D-216ENST00000581108 POTEGQ6S5H5 508 aa23.64■■□□□ 1.37
CSNK1D-216ENST00000581108 VPS52Q8N1B4 723 aa23.64■■□□□ 1.37
CSNK1D-216ENST00000581108 POP1Q99575 1024 aaKnown RBP23.64■■□□□ 1.37
CSNK1D-216ENST00000581108 DBR1Q9UK59 544 aaKnown RBP23.64■■□□□ 1.37
CSNK1D-216ENST00000581108 IPPQ9Y573 584 aa23.64■■□□□ 1.37
CSNK1D-216ENST00000581108 CNTNAP2Q9UHC6 1331 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 POMCP01189 267 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 ITGA4P13612 1032 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 RPA1P27694 616 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 CA8P35219 290 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 TRAPPC10P48553 1259 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 ANKRD54Q6NXT1 300 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 NOTUMQ6P988 496 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 CNNM3Q8NE01 707 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 ERMNQ8TAM6 284 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 AUTS2Q8WXX7 1259 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 NFKBIZQ9BYH8 718 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 CSRNP2Q9H175 543 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 RNF39Q9H2S5 420 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 NOL7Q9UMY1 257 aaKnown RBP23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 HES2Q9Y543 173 aa23.63■■□□□ 1.37
CSNK1D-216ENST00000581108 B4GALT5O43286 388 aa23.62■■□□□ 1.37
CSNK1D-216ENST00000581108 DCXO43602 365 aa23.62■■□□□ 1.37
CSNK1D-216ENST00000581108 SRGAP2BP0DMP2 458 aa23.62■■□□□ 1.37
CSNK1D-216ENST00000581108 ARF4P18085 180 aaPredicted RBP23.62■■□□□ 1.37
CSNK1D-216ENST00000581108 TOB1P50616 345 aaPredicted RBP23.62■■□□□ 1.37
CSNK1D-216ENST00000581108 DDX53Q86TM3 631 aaKnown RBP23.62■■□□□ 1.37
CSNK1D-216ENST00000581108 APOL5Q9BWW9 433 aa23.62■■□□□ 1.37
CSNK1D-216ENST00000581108 ZBP1Q9H171 429 aa23.62■■□□□ 1.37
CSNK1D-216ENST00000581108 S1PR5Q9H228 398 aa23.62■■□□□ 1.37
CSNK1D-216ENST00000581108 KANSL3Q9P2N6 904 aa23.62■■□□□ 1.37
CSNK1D-216ENST00000581108 TRIOO75962 3097 aa23.62■■□□□ 1.37
CSNK1D-216ENST00000581108 CARNS1A5YM72 827 aa23.61■■□□□ 1.37
CSNK1D-216ENST00000581108 CLASP2O75122 1294 aaKnown RBP23.61■■□□□ 1.37
CSNK1D-216ENST00000581108 BMS1Q14692 1282 aaKnown RBP23.61■■□□□ 1.37
CSNK1D-216ENST00000581108 SYCE2Q6PIF2 218 aa23.61■■□□□ 1.37
CSNK1D-216ENST00000581108 CDR2LQ86X02 465 aaPredicted RBP23.61■■□□□ 1.37
CSNK1D-216ENST00000581108 RNF135Q8IUD6 432 aa23.61■■□□□ 1.37
CSNK1D-216ENST00000581108 MCPH1Q8NEM0 835 aa23.61■■□□□ 1.37
CSNK1D-216ENST00000581108 CCDC51Q96ER9 411 aa23.61■■□□□ 1.37
CSNK1D-216ENST00000581108 FAM193BQ96PV7 902 aaPredicted RBP23.61■■□□□ 1.37
CSNK1D-216ENST00000581108 VN1R3Q9BXE9 311 aa23.61■■□□□ 1.37
CSNK1D-216ENST00000581108 UBN1Q9NPG3 1134 aa23.61■■□□□ 1.37
CSNK1D-216ENST00000581108 PCDHB6Q9Y5E3 794 aa23.61■■□□□ 1.37
CSNK1D-216ENST00000581108 TDRD15B5MCY1 1934 aaKnown RBP23.61■■□□□ 1.37
CSNK1D-216ENST00000581108 LRRIQ4A6NIV6 560 aa23.6■■□□□ 1.37
CSNK1D-216ENST00000581108 ST18O60284 1047 aa23.6■■□□□ 1.37
CSNK1D-216ENST00000581108 ALDH2P05091 517 aa23.6■■□□□ 1.37
CSNK1D-216ENST00000581108 FXR2P51116 673 aaKnown RBP eCLIP23.6■■□□□ 1.37
CSNK1D-216ENST00000581108 PTGDRQ13258 359 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms