RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 RNASELQ05823 741 aaKnown RBP23.67■■□□□ 1.38
CSNK1D-215ENST00000580784 POU5F1BQ06416 359 aa23.67■■□□□ 1.38
CSNK1D-215ENST00000580784 KCNC3Q14003 757 aa23.67■■□□□ 1.38
CSNK1D-215ENST00000580784 TFDP1Q14186 410 aa23.67■■□□□ 1.38
CSNK1D-215ENST00000580784 TTC38Q5R3I4 469 aa23.67■■□□□ 1.38
CSNK1D-215ENST00000580784 ZNF280BQ86YH2 543 aa23.67■■□□□ 1.38
CSNK1D-215ENST00000580784 TMEM169Q96HH4 297 aa23.67■■□□□ 1.38
CSNK1D-215ENST00000580784 GBP3Q9H0R5 595 aa23.67■■□□□ 1.38
CSNK1D-215ENST00000580784 TUFT1Q9NNX1 390 aa23.67■■□□□ 1.38
CSNK1D-215ENST00000580784 DNAJB4Q9UDY4 337 aa23.67■■□□□ 1.38
CSNK1D-215ENST00000580784 USO1O60763 962 aaKnown RBP23.66■■□□□ 1.38
CSNK1D-215ENST00000580784 GALTP07902 379 aa23.66■■□□□ 1.38
CSNK1D-215ENST00000580784 ORC2Q13416 577 aaPredicted RBP23.66■■□□□ 1.38
CSNK1D-215ENST00000580784 TMEM31Q5JXX7 168 aa23.66■■□□□ 1.38
CSNK1D-215ENST00000580784 LLGL2Q6P1M3 1020 aa23.66■■□□□ 1.38
CSNK1D-215ENST00000580784 MAEAQ7L5Y9 396 aa23.66■■□□□ 1.38
CSNK1D-215ENST00000580784 IFNLR1Q8IU57 520 aaPredicted RBP23.66■■□□□ 1.38
CSNK1D-215ENST00000580784 MRPL43Q8N983 215 aaKnown RBP23.66■■□□□ 1.38
CSNK1D-215ENST00000580784 SMG8Q8ND04 991 aaKnown RBP23.66■■□□□ 1.38
CSNK1D-215ENST00000580784 CPB2Q96IY4 423 aa23.66■■□□□ 1.38
CSNK1D-215ENST00000580784 POLR3CQ9BUI4 534 aaPredicted RBP23.66■■□□□ 1.38
CSNK1D-215ENST00000580784 RSAD1Q9HA92 442 aa23.66■■□□□ 1.38
CSNK1D-215ENST00000580784 USP15Q9Y4E8 981 aaPredicted RBP23.66■■□□□ 1.38
CSNK1D-215ENST00000580784 FSD2A1L4K1 749 aa23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 C2orf71A6NGG8 1288 aa23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 B4GALT3O60512 393 aa23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 GPR37L1O60883 481 aa23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 NCLP19338 710 aaKnown RBP23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 MBTD1Q05BQ5 628 aa23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 NBR1Q14596 966 aa23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 SMC1AQ14683 1233 aaKnown RBP23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 PCBP1Q15365 356 aaKnown RBP eCLIP23.65■■□□□ 1.383e-6■■□□□ 12.1
CSNK1D-215ENST00000580784 TMEM184AQ6ZMB5 413 aa23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 C4orf32Q8N8J7 132 aa23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 URGCPQ8TCY9 931 aa23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 BCL7CQ8WUZ0 217 aaPredicted RBP23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 IGSF21Q96ID5 467 aa23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 NACC1Q96RE7 527 aa23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 EIF2AQ9BY44 585 aaKnown RBP23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 POLR3FQ9H1D9 316 aaPredicted RBP23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 GPRC5CQ9NQ84 441 aa23.65■■□□□ 1.38
CSNK1D-215ENST00000580784 DDHD2O94830 711 aa23.64■■□□□ 1.37
CSNK1D-215ENST00000580784 CXCL14O95715 111 aa23.64■■□□□ 1.37
CSNK1D-215ENST00000580784 ALADP13716 330 aa23.64■■□□□ 1.37
CSNK1D-215ENST00000580784 U2AF2P26368 475 aaKnown RBP eCLIP23.64■■□□□ 1.374e-9■■■■□ 20.1
CSNK1D-215ENST00000580784 AXLP30530 894 aa23.64■■□□□ 1.37
CSNK1D-215ENST00000580784 SLC11A1P49279 550 aa23.64■■□□□ 1.37
CSNK1D-215ENST00000580784 NCBP1Q09161 790 aaKnown RBP23.64■■□□□ 1.37
CSNK1D-215ENST00000580784 RABEP1Q15276 862 aa23.64■■□□□ 1.37
CSNK1D-215ENST00000580784 AMHR2Q16671 573 aa23.64■■□□□ 1.37
CSNK1D-215ENST00000580784 POTEGQ6S5H5 508 aa23.64■■□□□ 1.37
CSNK1D-215ENST00000580784 VPS52Q8N1B4 723 aa23.64■■□□□ 1.37
CSNK1D-215ENST00000580784 POP1Q99575 1024 aaKnown RBP23.64■■□□□ 1.37
CSNK1D-215ENST00000580784 DBR1Q9UK59 544 aaKnown RBP23.64■■□□□ 1.37
CSNK1D-215ENST00000580784 IPPQ9Y573 584 aa23.64■■□□□ 1.37
CSNK1D-215ENST00000580784 CNTNAP2Q9UHC6 1331 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 POMCP01189 267 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 ITGA4P13612 1032 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 RPA1P27694 616 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 CA8P35219 290 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 TRAPPC10P48553 1259 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 ANKRD54Q6NXT1 300 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 NOTUMQ6P988 496 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 CNNM3Q8NE01 707 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 ERMNQ8TAM6 284 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 AUTS2Q8WXX7 1259 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 NFKBIZQ9BYH8 718 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 CSRNP2Q9H175 543 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 RNF39Q9H2S5 420 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 NOL7Q9UMY1 257 aaKnown RBP23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 HES2Q9Y543 173 aa23.63■■□□□ 1.37
CSNK1D-215ENST00000580784 B4GALT5O43286 388 aa23.62■■□□□ 1.37
CSNK1D-215ENST00000580784 DCXO43602 365 aa23.62■■□□□ 1.37
CSNK1D-215ENST00000580784 SRGAP2BP0DMP2 458 aa23.62■■□□□ 1.37
CSNK1D-215ENST00000580784 ARF4P18085 180 aaPredicted RBP23.62■■□□□ 1.37
CSNK1D-215ENST00000580784 TOB1P50616 345 aaPredicted RBP23.62■■□□□ 1.37
CSNK1D-215ENST00000580784 DDX53Q86TM3 631 aaKnown RBP23.62■■□□□ 1.37
CSNK1D-215ENST00000580784 APOL5Q9BWW9 433 aa23.62■■□□□ 1.37
CSNK1D-215ENST00000580784 ZBP1Q9H171 429 aa23.62■■□□□ 1.37
CSNK1D-215ENST00000580784 S1PR5Q9H228 398 aa23.62■■□□□ 1.37
CSNK1D-215ENST00000580784 KANSL3Q9P2N6 904 aa23.62■■□□□ 1.37
CSNK1D-215ENST00000580784 TRIOO75962 3097 aa23.62■■□□□ 1.37
CSNK1D-215ENST00000580784 CARNS1A5YM72 827 aa23.61■■□□□ 1.37
CSNK1D-215ENST00000580784 CLASP2O75122 1294 aaKnown RBP23.61■■□□□ 1.37
CSNK1D-215ENST00000580784 BMS1Q14692 1282 aaKnown RBP23.61■■□□□ 1.37
CSNK1D-215ENST00000580784 SYCE2Q6PIF2 218 aa23.61■■□□□ 1.37
CSNK1D-215ENST00000580784 CDR2LQ86X02 465 aaPredicted RBP23.61■■□□□ 1.37
CSNK1D-215ENST00000580784 RNF135Q8IUD6 432 aa23.61■■□□□ 1.37
CSNK1D-215ENST00000580784 MCPH1Q8NEM0 835 aa23.61■■□□□ 1.37
CSNK1D-215ENST00000580784 CCDC51Q96ER9 411 aa23.61■■□□□ 1.37
CSNK1D-215ENST00000580784 FAM193BQ96PV7 902 aaPredicted RBP23.61■■□□□ 1.37
CSNK1D-215ENST00000580784 VN1R3Q9BXE9 311 aa23.61■■□□□ 1.37
CSNK1D-215ENST00000580784 UBN1Q9NPG3 1134 aa23.61■■□□□ 1.37
CSNK1D-215ENST00000580784 PCDHB6Q9Y5E3 794 aa23.61■■□□□ 1.37
CSNK1D-215ENST00000580784 TDRD15B5MCY1 1934 aaKnown RBP23.61■■□□□ 1.37
CSNK1D-215ENST00000580784 LRRIQ4A6NIV6 560 aa23.6■■□□□ 1.37
CSNK1D-215ENST00000580784 ST18O60284 1047 aa23.6■■□□□ 1.37
CSNK1D-215ENST00000580784 ALDH2P05091 517 aa23.6■■□□□ 1.37
CSNK1D-215ENST00000580784 FXR2P51116 673 aaKnown RBP eCLIP23.6■■□□□ 1.37
CSNK1D-215ENST00000580784 PTGDRQ13258 359 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms