RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 CTCFP49711 727 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 PTENP60484 403 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 SNRPFP62306 86 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 CCDC40Q4G0X9 1142 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 APTXQ7Z2E3 356 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 SCLT1Q96NL6 688 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 RNF208Q9H0X6 261 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 PAK6Q9NQU5 681 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 TAB2Q9NYJ8 693 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 A0A087WZ62 844 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 ANKRD63C9JTQ0 380 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 GNA14O95837 355 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 LIG4P49917 911 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 CYP2J2P51589 502 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 NLRP11P59045 1033 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 POU5F1BQ06416 359 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 MAPK6Q16659 721 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 CEP135Q66GS9 1140 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 ARMCX5Q6P1M9 558 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 DNAJB3Q8WWF6 145 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 NLRP7Q8WX94 980 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 MRFAP1L1Q96HT8 127 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 GLT1D1Q96MS3 346 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 DEFB118Q96PH6 123 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 FDXACB1Q9BRP7 624 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 NFKBIZQ9BYH8 718 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 CCDC113Q9H0I3 377 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 IFT122Q9HBG6 1241 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 SIP14410 1827 aa15.16■□□□□ 0.02
CDK5RAP3-219ENST00000580670 GRIN2DO15399 1336 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 LRRC10BA6NIK2 292 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 KBTBD13C9JR72 458 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 INO80B-WBP1J3KQ70 363 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 PRKCBP05771 671 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 TPM3P06753 285 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 GPC3P51654 580 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 COPB1P53618 953 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 MYBPC2Q14324 1141 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 FILIP1LQ4L180 1135 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 GDF6Q6KF10 455 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 SLC39A4Q6P5W5 647 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 FBXO46Q6PJ61 603 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 ZNF410Q86VK4 478 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 SESTD1Q86VW0 696 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 SLC9A9Q8IVB4 645 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 C12orf56Q8IXR9 622 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 CBWD1Q9BRT8 395 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 TUBGCP2Q9BSJ2 902 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 INO80BQ9C086 356 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 VPS16Q9H269 839 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 PCIF1Q9H4Z3 704 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 DMAC2Q9NW81 257 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 USP20Q9Y2K6 914 aa15.15■□□□□ 0.02
CDK5RAP3-219ENST00000580670 A0A1B0GTH6 734 aa15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 N4BP3O15049 544 aa15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 SLC16A3O15427 465 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 AKAP3O75969 853 aa15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 PIGRP01833 764 aa15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 EPB41P11171 864 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 CASP4P49662 377 aa15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 CDC42EP1Q00587 391 aa15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 MBTD1Q05BQ5 628 aa15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TMEM62Q0P6H9 643 aa15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ITGA7Q13683 1181 aa15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TAF2Q6P1X5 1199 aa15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 IFNLR1Q8IU57 520 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TARS2Q9BW92 718 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 MINDY3Q9H8M7 445 aa15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 HSPBP1Q9NZL4 362 aa15.14■□□□□ 0.01
CDK5RAP3-219ENST00000580670 A0A1W2PQ45 241 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 A0A1W2PQY0 241 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 EXOC3O60645 756 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 EDN1P05305 212 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ADSSP30520 456 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 KIZQ2M2Z5 673 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 NME8Q8N427 588 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TMEM174Q8WUU8 243 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 POMGNT1Q8WZA1 660 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 MRPL4Q9BYD3 311 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ADAMTS10Q9H324 1103 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 FZD8Q9H461 694 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 INTS13Q9NVM9 706 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 GINS2Q9Y248 185 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 FRMD4BQ9Y2L6 1034 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 PES1O00541 588 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 GPR32O75388 356 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 CDC25BP30305 580 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 PSMC2P35998 433 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 MARSP56192 900 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 NR1I3Q14994 352 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 PKN2Q16513 984 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 FRMD5Q7Z6J6 570 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 DRC7Q8IY82 874 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 FAM186BQ8IYM0 893 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 XXYLT1Q8NBI6 393 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 MKNK1Q9BUB5 465 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 NOC4LQ9BVI4 516 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ZMYND15Q9H091 742 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 PRMT7Q9NVM4 692 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms