RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 CREB5Q02930 508 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 CFHR1Q03591 330 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 ZNF543Q08ER8 600 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 PGM5Q15124 567 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 GNPTABQ3T906 1256 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 PLK5Q496M5 336 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 RRP12Q5JTH9 1297 aaKnown RBP2.78□□□□□ -1.96
SNORD53-201ENST00000579969 COLEC12Q5KU26 742 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 TANGO2Q6ICL3 276 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 ZSCAN25Q6NSZ9 544 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 CCNI2Q6ZMN8 369 aaPredicted RBP2.78□□□□□ -1.96
SNORD53-201ENST00000579969 GRASPQ7Z6J2 395 aaPredicted RBP2.78□□□□□ -1.96
SNORD53-201ENST00000579969 RAB44Q7Z6P3 723 aaPredicted RBP2.78□□□□□ -1.96
SNORD53-201ENST00000579969 FAM228AQ86W67 206 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 ECHDC2Q86YB7 292 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 PALB2Q86YC2 1186 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 KIAA0319LQ8IZA0 1049 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 ZNF710Q8N1W2 664 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 CEP120Q8N960 986 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 IL31RAQ8NI17 732 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 ITFG1Q8TB96 612 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 BCL7CQ8WUZ0 217 aaPredicted RBP2.78□□□□□ -1.96
SNORD53-201ENST00000579969 TRAPPC12Q8WVT3 735 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 TMEM40Q8WWA1 233 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 FGF13Q92913 245 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 TNPO1Q92973 898 aaKnown RBP2.78□□□□□ -1.96
SNORD53-201ENST00000579969 ZC3H10Q96K80 434 aaKnown RBP2.78□□□□□ -1.96
SNORD53-201ENST00000579969 RPS6KC1Q96S38 1066 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 KXD1Q9BQD3 176 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 SENP7Q9BQF6 1050 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 TMEM47Q9BQJ4 181 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 VN1R3Q9BXE9 311 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 MRPL9Q9BYD2 267 aaKnown RBP2.78□□□□□ -1.96
SNORD53-201ENST00000579969 NACAP1Q9BZK3 213 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 PLA2G2FQ9BZM2 168 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 CPVLQ9H3G5 476 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 SMARCAD1Q9H4L7 1026 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 NRDE2Q9H7Z3 1164 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 BRD9Q9H8M2 597 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 RXFP1Q9HBX9 757 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 VAT1LQ9HCJ6 419 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 IL1RAPL2Q9NP60 686 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 JADE2Q9NQC1 790 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 C2orf42Q9NWW7 574 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 MAP3K20Q9NYL2 800 aaKnown RBP2.78□□□□□ -1.96
SNORD53-201ENST00000579969 RTEL1Q9NZ71 1219 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 STK39Q9UEW8 545 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 SSX2IPQ9Y2D8 614 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 AHCTF1Q8WYP5 2266 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 CFAP46Q8IYW2 2715 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 ANKRD17O75179 2603 aaKnown RBP2.78□□□□□ -1.96
SNORD53-201ENST00000579969 ABCA7Q8IZY2 2146 aa2.78□□□□□ -1.96
SNORD53-201ENST00000579969 LOXHD1Q8IVV2 1947 aa2.78□□□□□ -1.97
SNORD53-201ENST00000579969 UBR5O95071 2799 aaPredicted RBP2.78□□□□□ -1.97
SNORD53-201ENST00000579969 NBPF19A0A087WUL8 3843 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 A0A087WV48 116 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 CCDC163A0A0D9SF12 145 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 A0A0U1RQF3 1178 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 LNP1A1A4G5 178 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 ENO4A6NNW6 628 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 MEFVO15553 781 aaPredicted RBP2.77□□□□□ -1.97
SNORD53-201ENST00000579969 FIBPO43427 364 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 TGM5O43548 720 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 ATP9AO75110 1047 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 ECI2O75521 394 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 ZMYND10O75800 440 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 STAM2O75886 525 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 RHOBTB1O94844 696 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 C1RP00736 705 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 IFIT2P09913 472 aaKnown RBP2.77□□□□□ -1.97
SNORD53-201ENST00000579969 GOLGA8HP0CJ92 632 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 SNHG28P0DPA3 235 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 ATP5JP18859 108 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 GNAT2P19087 354 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 CCNE1P24864 410 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 KLRC1P26715 233 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 HOXA13P31271 388 aaPredicted RBP2.77□□□□□ -1.97
SNORD53-201ENST00000579969 MRPS9P82933 396 aaKnown RBP2.77□□□□□ -1.97
SNORD53-201ENST00000579969 RNASELQ05823 741 aaKnown RBP2.77□□□□□ -1.97
SNORD53-201ENST00000579969 CTDSPL2Q05D32 466 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 PPARAQ07869 468 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 CYP4F3Q08477 520 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 PTGDRQ13258 359 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 SEMA3FQ13275 785 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 LRRC32Q14392 662 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 PLCB4Q15147 1175 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 ELF2Q15723 593 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 CDC37Q16543 378 aaPredicted RBP2.77□□□□□ -1.97
SNORD53-201ENST00000579969 ZNF423Q2M1K9 1284 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 KIZQ2M2Z5 673 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 HSP90AB4PQ58FF6 505 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 PDXDC2PQ6P474 469 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 LILRA6Q6PI73 481 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 CASC1Q6TDU7 716 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 MTHFD1LQ6UB35 978 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 TAS1R1Q7RTX1 841 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 PIP4P1Q86T03 277 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 ZNF598Q86UK7 904 aaKnown RBP2.77□□□□□ -1.97
SNORD53-201ENST00000579969 FCHSD1Q86WN1 690 aa2.77□□□□□ -1.97
SNORD53-201ENST00000579969 ERC1Q8IUD2 1116 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms