RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 PRMT7Q9NVM4 692 aaPredicted RBP18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TRPV2Q9Y5S1 764 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 M0QZ92 97 aa18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 HNRNPDLO14979 420 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 FGFR1OPO95684 399 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 FKBP3Q00688 224 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 RBL2Q08999 1139 aa18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 MYBPC2Q14324 1141 aa18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TPD52L1Q16890 204 aaPredicted RBP18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 C1orf53Q5VUE5 145 aa18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 ZPBP2Q6X784 338 aa18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 FAM126BQ8IXS8 530 aa18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 CSGALNACT2Q8N6G5 542 aa18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 WNT8BQ93098 351 aa18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 CEP63Q96MT8 703 aa18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 PPP1R16BQ96T49 567 aa18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 MRPL4Q9BYD3 311 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 GCOM2Q9BZD3 368 aaPredicted RBP18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 FZD8Q9H461 694 aa18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 AGPAT3Q9NRZ7 376 aa18.34■□□□□ 0.53
CDK5RAP3-215ENST00000579780 CNTNAP2Q9UHC6 1331 aa18.33■□□□□ 0.53
CDK5RAP3-215ENST00000579780 INO80B-WBP1J3KQ70 363 aa18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 ACKR2O00590 384 aa18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 B4GALT4O60513 344 aa18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 NR3C1P04150 777 aa18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 ZNF18P17022 549 aa18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 CRYBB1P53674 252 aaPredicted RBP18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 MGAT3Q09327 533 aa18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 KIZQ2M2Z5 673 aa18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 TRIM71Q2Q1W2 868 aaKnown RBP18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 CDKAL1Q5VV42 579 aa18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 SLC9A9Q8IVB4 645 aa18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 DHX38Q92620 1227 aaKnown RBP18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 BICD1Q96G01 975 aa18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 OSMRQ99650 979 aa18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 INO80BQ9C086 356 aaPredicted RBP18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 HSD3B7Q9H2F3 369 aa18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 GRPEL1Q9HAV7 217 aa18.33■□□□□ 0.52
CDK5RAP3-215ENST00000579780 EDN1P05305 212 aa18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 DARSP14868 501 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 NR2F2P24468 414 aa18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 RPL13P26373 211 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 LIG4P49917 911 aa18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 SPAG1Q07617 926 aa18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 TMEM62Q0P6H9 643 aa18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 SLC39A4Q6P5W5 647 aa18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 FAM114A1Q8IWE2 563 aa18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 CAGE1Q8TC20 777 aa18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 ZNF668Q96K58 619 aaPredicted RBP18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 CELF4Q9BZC1 486 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 SENP6Q9GZR1 1112 aaPredicted RBP18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 MINDY3Q9H8M7 445 aa18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 FANCLQ9NW38 375 aa18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 CDY2AQ9Y6F7 541 aa18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 KIAA0100Q14667 2235 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP3-215ENST00000579780 KIAA0391O15091 583 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 SLC16A3O15427 465 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 CD4P01730 458 aa18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 GARTP22102 1010 aa18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 SFPQP23246 707 aaKnown RBP eCLIP18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 EIF4BP23588 611 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 MRE11P49959 708 aa18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 PRPF4BQ13523 1007 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 AMHR2Q16671 573 aa18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 FAM26DQ5JW98 314 aa18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 ARMCX5Q6P1M9 558 aa18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 ANKRD33Q7Z3H0 272 aa18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 CCDC155Q8N6L0 562 aa18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 DIS3LQ8TF46 1054 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 SRRTQ9BXP5 876 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 TRPV6Q9H1D0 765 aa18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 C11orf49Q9H6J7 331 aa18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 STYXL1Q9Y6J8 313 aa18.31■□□□□ 0.52
CDK5RAP3-215ENST00000579780 CETN3O15182 167 aa18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 TLR3O15455 904 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 TOM1L1O75674 476 aa18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 ERLIN2O94905 339 aa18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 GNA14O95837 355 aa18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 EEF1GP26641 437 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 THPOP40225 353 aa18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 HSP90AA2PQ14568 343 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 SLFN12LQ6IEE8 588 aa18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 SLC39A5Q6ZMH5 540 aa18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 TSHZ1Q6ZSZ6 1077 aa18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 TOX2Q96NM4 488 aa18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 MKNK1Q9BUB5 465 aa18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 TARS2Q9BW92 718 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 IKZF4Q9H2S9 585 aa18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 SAMSN1Q9NSI8 373 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 DMAC2Q9NW81 257 aa18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 GINS2Q9Y248 185 aa18.3■□□□□ 0.52
CDK5RAP3-215ENST00000579780 TISP43B9A030 160 aa18.29■□□□□ 0.52
CDK5RAP3-215ENST00000579780 ANKRD63C9JTQ0 380 aa18.29■□□□□ 0.52
CDK5RAP3-215ENST00000579780 CLIC2O15247 247 aa18.29■□□□□ 0.52
CDK5RAP3-215ENST00000579780 TSPAN1O60635 241 aa18.29■□□□□ 0.52
CDK5RAP3-215ENST00000579780 CTSHP09668 335 aa18.29■□□□□ 0.52
CDK5RAP3-215ENST00000579780 IQCF3P0C7M6 154 aa18.29■□□□□ 0.52
CDK5RAP3-215ENST00000579780 PROZP22891 400 aa18.29■□□□□ 0.52
CDK5RAP3-215ENST00000579780 MARSP56192 900 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-215ENST00000579780 SARM1Q6SZW1 724 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms