RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 MAGEF1Q9HAY2 307 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 KMT5AQ9NQR1 393 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 RWDD3Q9Y3V2 267 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 MYH15Q9Y2K3 1946 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 NPHP3-ACAD11A0A0J9YXS1 232 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 A0A1B0GUA9 196 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 CCDC169A6NNP5 214 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 B4GALT5O43286 388 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 TBCAO75347 108 aaKnown RBP11.06□□□□□ -0.64
MKS1-208ENST00000579358 FAM13AO94988 1023 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 KRT18P05783 430 aaKnown RBP11.06□□□□□ -0.64
MKS1-208ENST00000579358 CMA1P23946 247 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 ABCD1P33897 745 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 NCKAP1LP55160 1127 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 ERVK-21P61565 698 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 CACNB1Q02641 598 aaPredicted RBP11.06□□□□□ -0.64
MKS1-208ENST00000579358 RAD51AP2Q09MP3 1159 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 PRPF4BQ13523 1007 aaKnown RBP11.06□□□□□ -0.64
MKS1-208ENST00000579358 GIT2Q14161 759 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 BTG3Q14201 252 aaPredicted RBP11.06□□□□□ -0.64
MKS1-208ENST00000579358 DHX8Q14562 1220 aaKnown RBP11.06□□□□□ -0.64
MKS1-208ENST00000579358 SLC27A1Q6PCB7 646 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 MRPL10Q7Z7H8 261 aaKnown RBP11.06□□□□□ -0.64
MKS1-208ENST00000579358 FIBCD1Q8N539 461 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 PDILTQ8N807 584 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 IQUBQ8NA54 791 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 DDX12PQ92771 950 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 CLP1Q92989 425 aaKnown RBP11.06□□□□□ -0.64
MKS1-208ENST00000579358 PGBD4Q96DM1 585 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 FAM161BQ96MY7 647 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 GUCD1Q96NT3 240 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 LRRC27Q9C0I9 530 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 TMEM117Q9H0C3 514 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 TNMDQ9H2S6 317 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 PARVGQ9HBI0 331 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 POLD4Q9HCU8 107 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 RNF19AQ9NV58 838 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 SEL1LQ9UBV2 794 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 PCDHB2Q9Y5E7 798 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 EVPLQ92817 2033 aa11.06□□□□□ -0.64
MKS1-208ENST00000579358 LOXHD1Q8IVV2 1947 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 A0A1W2PQ27 194 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 A0A1W2PQ64 194 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 A0A1W2PQD8 194 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 MYMKA6NI61 221 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 TBKBP1A7MCY6 615 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 SFI1A8K8P3 1242 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 K7ERI5 159 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 N4BP3O15049 544 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 LINC00271P0C7V0 271 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 FGFR1P11362 822 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 AMPD3Q01432 767 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 GRIN2CQ14957 1233 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 HACE1Q8IYU2 909 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 ABI1Q8IZP0 508 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 SLC17A8Q8NDX2 589 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 TMEM161BQ8NDZ6 487 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 DHX58Q96C10 678 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 CPB2Q96IY4 423 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 CHAMP1Q96JM3 812 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 CASD1Q96PB1 797 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 ADPGKQ9BRR6 497 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 PANK2Q9BZ23 570 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 UBN1Q9NPG3 1134 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 KBTBD4Q9NVX7 518 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 PTPRSQ13332 1948 aa11.05□□□□□ -0.64
MKS1-208ENST00000579358 ZMYM2Q9UBW7 1377 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 FAM237AA0A1B0GTK4 181 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 C5orf67F2Z3F1 127 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 SLC16A4O15374 487 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 POLR2DO15514 142 aaKnown RBP11.04□□□□□ -0.64
MKS1-208ENST00000579358 TRAK2O60296 914 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 MAPTP10636 758 aaKnown RBP11.04□□□□□ -0.64
MKS1-208ENST00000579358 GAP43P17677 238 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 IBSPP21815 317 aaPredicted RBP11.04□□□□□ -0.64
MKS1-208ENST00000579358 GATMP50440 423 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 STRN3Q13033 797 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 DCAF4L1Q3SXM0 396 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 PAN2Q504Q3 1202 aaKnown RBP11.04□□□□□ -0.64
MKS1-208ENST00000579358 CLLU1OSQ5K130 101 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 CNNM4Q6P4Q7 775 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 GLB1LQ6UWU2 654 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 DYMQ7RTS9 669 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 TAS1R3Q7RTX0 852 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 APBB1IPQ7Z5R6 666 aaPredicted RBP11.04□□□□□ -0.64
MKS1-208ENST00000579358 LRRC43Q8N309 656 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 MYCT1Q8N699 235 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 RNF169Q8NCN4 708 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 SMG8Q8ND04 991 aaKnown RBP11.04□□□□□ -0.64
MKS1-208ENST00000579358 DNAJC19Q96DA6 116 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 FIZ1Q96SL8 496 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 GAS2L1Q99501 681 aaPredicted RBP11.04□□□□□ -0.64
MKS1-208ENST00000579358 CDX2Q99626 313 aaPredicted RBP11.04□□□□□ -0.64
MKS1-208ENST00000579358 C17orf80Q9BSJ5 609 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 PLVAPQ9BX97 442 aa11.04□□□□□ -0.64
MKS1-208ENST00000579358 EIF2AQ9BY44 585 aaKnown RBP11.04□□□□□ -0.64
MKS1-208ENST00000579358 MRPL9Q9BYD2 267 aaKnown RBP11.04□□□□□ -0.64
MKS1-208ENST00000579358 MRPL4Q9BYD3 311 aaKnown RBP11.04□□□□□ -0.64
MKS1-208ENST00000579358 TRIM6Q9C030 488 aaPredicted RBP11.04□□□□□ -0.64
MKS1-208ENST00000579358 ST6GALNAC4Q9H4F1 302 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms