RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 RIF1Q5UIP0 2472 aaKnown RBP9.58□□□□□ -0.88
CASC3-206ENST00000579238 DENND4AQ7Z401 1863 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 M0R2N6 131 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 NRP1O14786 923 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 DKC1O60832 514 aaKnown RBP eCLIP9.58□□□□□ -0.88
CASC3-206ENST00000579238 DDHD2O94830 711 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 URODP06132 367 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 NPR3P17342 541 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 PDIA3P30101 505 aaKnown RBP9.58□□□□□ -0.88
CASC3-206ENST00000579238 HSPA4P34932 840 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 CCT2P78371 535 aaKnown RBP9.58□□□□□ -0.88
CASC3-206ENST00000579238 PLA2G4FQ68DD2 849 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 CYP26C1Q6V0L0 522 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 SRGAP1Q7Z6B7 1085 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 SKAP1Q86WV1 359 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 EXOC8Q8IYI6 725 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 CCDC105Q8IYK2 499 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 BLIDQ8IZY5 108 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 FAM177A1Q8N128 213 aaPredicted RBP9.58□□□□□ -0.88
CASC3-206ENST00000579238 PSPC1Q8WXF1 523 aaKnown RBP9.58□□□□□ -0.88
CASC3-206ENST00000579238 SLC7A3Q8WY07 619 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 RHOBTB2Q9BYZ6 727 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 KCNK12Q9HB15 430 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 NCOA5Q9HCD5 579 aaKnown RBP9.58□□□□□ -0.88
CASC3-206ENST00000579238 FBXL21Q9UKT6 434 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 SSX2IPQ9Y2D8 614 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 PPME1Q9Y570 386 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 COL4A3BPQ9Y5P4 624 aa9.58□□□□□ -0.88
CASC3-206ENST00000579238 EML1O00423 815 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 PI15O43692 258 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 SOD2P04179 222 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 SSBP05455 408 aaKnown RBP eCLIP9.57□□□□□ -0.88
CASC3-206ENST00000579238 NCLP19338 710 aaKnown RBP9.57□□□□□ -0.88
CASC3-206ENST00000579238 PSMA5P28066 241 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 HOXA11P31270 313 aaPredicted RBP9.57□□□□□ -0.88
CASC3-206ENST00000579238 RFC5P40937 340 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 QARSP47897 775 aaKnown RBP9.57□□□□□ -0.88
CASC3-206ENST00000579238 AFF1P51825 1210 aaKnown RBP9.57□□□□□ -0.88
CASC3-206ENST00000579238 AK2P54819 239 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 NPEPPSP55786 919 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 SSRP1Q08945 709 aaKnown RBP9.57□□□□□ -0.88
CASC3-206ENST00000579238 PPP2R5CQ13362 524 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 NONOQ15233 471 aaKnown RBP eCLIP9.57□□□□□ -0.88
CASC3-206ENST00000579238 UBXN11Q5T124 520 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 GALNT17Q6IS24 598 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 ELMSAN1Q6PJG2 1045 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 CENPQQ7L2Z9 268 aaPredicted RBP9.57□□□□□ -0.88
CASC3-206ENST00000579238 ADSSL1Q8N142 457 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 SIX5Q8N196 739 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 DTWD2Q8NBA8 298 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 DAGLBQ8NCG7 672 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 CNNM3Q8NE01 707 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 STAMQ92783 540 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 CEP170P1Q96L14 293 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 FAM20AQ96MK3 541 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 RPS6KC1Q96S38 1066 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 HERC2P3Q9BVR0 1158 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 DHX33Q9H6R0 707 aaKnown RBP9.57□□□□□ -0.88
CASC3-206ENST00000579238 MINDY3Q9H8M7 445 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 WDR6Q9NNW5 1121 aaKnown RBP9.57□□□□□ -0.88
CASC3-206ENST00000579238 UBN1Q9NPG3 1134 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 MAN1C1Q9NR34 630 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 DDX25Q9UHL0 483 aaKnown RBP9.57□□□□□ -0.88
CASC3-206ENST00000579238 DPP7Q9UHL4 492 aa9.57□□□□□ -0.88
CASC3-206ENST00000579238 VPS13AQ96RL7 3174 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 CCDC195A0A1B0GUA6 201 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 C2CD2LO14523 706 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 ASAP2O43150 1006 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 SLC37A4O43826 429 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 GAS2O43903 313 aaKnown RBP9.56□□□□□ -0.88
CASC3-206ENST00000579238 DEXIO95424 95 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 GLUD1P00367 558 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 POMCP01189 267 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 P4HBP07237 508 aaKnown RBP9.56□□□□□ -0.88
CASC3-206ENST00000579238 ADH1AP07327 375 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 SRGAP2CP0DJJ0 459 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 LAMTOR4Q0VGL1 99 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 ANGPT1Q15389 498 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 NPY5RQ15761 445 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 ERMP1Q7Z2K6 904 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 KRT25Q7Z3Z0 450 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 COLGALT2Q8IYK4 626 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 TCP11Q8WWU5 503 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 PRPF31Q8WWY3 499 aaKnown RBP9.56□□□□□ -0.88
CASC3-206ENST00000579238 NXPE3Q969Y0 559 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 TMEM143Q96AN5 459 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 RXFP1Q9HBX9 757 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 KCNMB3Q9NPA1 279 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 MARCH5Q9NX47 278 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 EPS15L1Q9UBC2 864 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 WNT16Q9UBV4 365 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 VAV3Q9UKW4 847 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 CLUHO75153 1309 aa9.56□□□□□ -0.88
CASC3-206ENST00000579238 CPLX1O14810 134 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 INPPL1O15357 1258 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 TEX28O15482 410 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 NARSO43776 548 aaKnown RBP9.55□□□□□ -0.88
CASC3-206ENST00000579238 N4BP1O75113 896 aaKnown RBP9.55□□□□□ -0.88
CASC3-206ENST00000579238 ERLIN2O94905 339 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 PAPLNO95428 1278 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms