RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 DEFB128Q7Z7B8 93 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 FAM228AQ86W67 206 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 IFNLR1Q8IU57 520 aaPredicted RBP13.34□□□□□ -0.27
IFT20-207ENST00000578547 MYOCDQ8IZQ8 938 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 TMEM199Q8N511 208 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 TRIML1Q8N9V2 468 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 VWCEQ96DN2 955 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 IKZF4Q9H2S9 585 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 PRMT7Q9NVM4 692 aaPredicted RBP13.34□□□□□ -0.27
IFT20-207ENST00000578547 TBX20Q9UMR3 447 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 PCDHB13Q9Y5F0 798 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 CEP290O15078 2479 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 EIF3DO15371 548 aaKnown RBP eCLIP13.33□□□□□ -0.28
IFT20-207ENST00000578547 TSPAN1O60635 241 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 PPP1R37O75864 691 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 LETM1O95202 739 aaPredicted RBP13.33□□□□□ -0.28
IFT20-207ENST00000578547 EDN1P05305 212 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 BMP6P22004 513 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 GTF2BQ00403 316 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 KCNA1Q09470 495 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 PRPF4BQ13523 1007 aaKnown RBP13.33□□□□□ -0.28
IFT20-207ENST00000578547 STIM1Q13586 685 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 DPCR1Q3MIW9 517 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 KLHL10Q6JEL2 608 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 EPM2AIP1Q7L775 607 aaPredicted RBP13.33□□□□□ -0.28
IFT20-207ENST00000578547 SYCP3Q8IZU3 236 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 SCFD1Q8WVM8 642 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 HVCN1Q96D96 273 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 ACCSQ96QU6 501 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 IFIH1Q9BYX4 1025 aaKnown RBP13.33□□□□□ -0.28
IFT20-207ENST00000578547 ST6GALNAC4Q9H4F1 302 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 TMEM134Q9H6X4 195 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 AGO3Q9H9G7 860 aaKnown RBP13.33□□□□□ -0.28
IFT20-207ENST00000578547 ST3GAL5Q9UNP4 418 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 PIN4Q9Y237 131 aaKnown RBP13.33□□□□□ -0.28
IFT20-207ENST00000578547 UBE4BO95155 1302 aa13.33□□□□□ -0.28
IFT20-207ENST00000578547 TTLL13PA6NNM8 815 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 HNRNPDLO14979 420 aaKnown RBP13.32□□□□□ -0.28
IFT20-207ENST00000578547 GPR182O15218 404 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 KIF20AO95235 890 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 ACRP10323 421 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 SCP2P22307 547 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 ABCD1P33897 745 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 RFC2P35250 354 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 PRCPP42785 496 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 MAGEA10P43363 369 aaPredicted RBP13.32□□□□□ -0.28
IFT20-207ENST00000578547 LIG4P49917 911 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 EPHB4P54760 987 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 NLRP12P59046 1061 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 FPGSQ05932 587 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 TYRO3Q06418 890 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 STX1AQ16623 288 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 AMHR2Q16671 573 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 TCTN1Q2MV58 587 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 C16orf59Q7L2K0 433 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 CDR2LQ86X02 465 aaPredicted RBP13.32□□□□□ -0.28
IFT20-207ENST00000578547 MAP4K3Q8IVH8 894 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 USP38Q8NB14 1042 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 ZNF507Q8TCN5 953 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 CPB2Q96IY4 423 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 LBHD1Q9BQE6 289 aaPredicted RBP13.32□□□□□ -0.28
IFT20-207ENST00000578547 TARS2Q9BW92 718 aaKnown RBP13.32□□□□□ -0.28
IFT20-207ENST00000578547 STRA6Q9BX79 667 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 MRPL4Q9BYD3 311 aaKnown RBP13.32□□□□□ -0.28
IFT20-207ENST00000578547 GTPBP4Q9BZE4 634 aaKnown RBP13.32□□□□□ -0.28
IFT20-207ENST00000578547 FZD8Q9H461 694 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 ERVK-5Q9HDB9 667 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 ANKFY1Q9P2R3 1169 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 PADI3Q9ULW8 664 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 EXOC7Q9UPT5 735 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 CTNND2Q9UQB3 1225 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 CNTNAP2Q9UHC6 1331 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 SCN5AQ14524 2016 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 ZMYM2Q9UBW7 1377 aa13.32□□□□□ -0.28
IFT20-207ENST00000578547 TNRC18O15417 2968 aaPredicted RBP13.31□□□□□ -0.28
IFT20-207ENST00000578547 TISP43B9A030 160 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 ACKR2O00590 384 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 PARNO95453 639 aaKnown RBP13.31□□□□□ -0.28
IFT20-207ENST00000578547 CXCL10P02778 98 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 HARSP12081 509 aaKnown RBP13.31□□□□□ -0.28
IFT20-207ENST00000578547 CD44P16070 742 aaKnown RBP13.31□□□□□ -0.28
IFT20-207ENST00000578547 IBSPP21815 317 aaPredicted RBP13.31□□□□□ -0.28
IFT20-207ENST00000578547 HOXD13P35453 343 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 MATR3P43243 847 aaKnown RBP eCLIP13.31□□□□□ -0.28
IFT20-207ENST00000578547 NCBP1Q09161 790 aaKnown RBP13.31□□□□□ -0.28
IFT20-207ENST00000578547 PPIGQ13427 754 aaKnown RBP eCLIP13.31□□□□□ -0.28
IFT20-207ENST00000578547 FAM187BQ17R55 369 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 ATF7IP2Q5U623 682 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 ADSSL1Q8N142 457 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 GUF1Q8N442 669 aaKnown RBP13.31□□□□□ -0.28
IFT20-207ENST00000578547 DBF4BQ8NFT6 615 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 SEPT8Q92599 483 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 PRIMPOLQ96LW4 560 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 TMEM206Q9H813 350 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 IL23AQ9NPF7 189 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 AGPAT5Q9NUQ2 364 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 SQORQ9Y6N5 450 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 PDE4DIPQ5VU43 2346 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 LTBP2Q14767 1821 aa13.31□□□□□ -0.28
IFT20-207ENST00000578547 ANKRD63C9JTQ0 380 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms