RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 CCDC51Q96ER9 411 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 BLOC1S4Q9NUP1 217 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 RNF19AQ9NV58 838 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 DAXXQ9UER7 740 aaPredicted RBP24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 CCDC39Q9UFE4 941 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 RWDD3Q9Y3V2 267 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 MRPL42Q9Y6G3 142 aaKnown RBP24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 LINC00271P0C7V0 271 aa24.51■■□□□ 1.51
SMARCD2-206ENST00000577990 TFF2Q03403 129 aa24.51■■□□□ 1.51
SMARCD2-206ENST00000577990 MAPK7Q13164 816 aa24.51■■□□□ 1.51
SMARCD2-206ENST00000577990 NOTUMQ6P988 496 aa24.51■■□□□ 1.51
SMARCD2-206ENST00000577990 PPP4R3CPQ6ZMV5 832 aa24.51■■□□□ 1.51
SMARCD2-206ENST00000577990 ATXN2LQ8WWM7 1075 aaKnown RBP24.51■■□□□ 1.51
SMARCD2-206ENST00000577990 ASB2Q96Q27 587 aa24.51■■□□□ 1.51
SMARCD2-206ENST00000577990 TMEM117Q9H0C3 514 aa24.51■■□□□ 1.51
SMARCD2-206ENST00000577990 PRMT7Q9NVM4 692 aaPredicted RBP24.51■■□□□ 1.51
SMARCD2-206ENST00000577990 ZNF623O75123 536 aa24.5■■□□□ 1.51
SMARCD2-206ENST00000577990 CTNNB1P35222 781 aa24.5■■□□□ 1.51
SMARCD2-206ENST00000577990 UBXN11Q5T124 520 aa24.5■■□□□ 1.51
SMARCD2-206ENST00000577990 ABI1Q8IZP0 508 aa24.5■■□□□ 1.51
SMARCD2-206ENST00000577990 CPB2Q96IY4 423 aa24.5■■□□□ 1.51
SMARCD2-206ENST00000577990 PRIMPOLQ96LW4 560 aa24.5■■□□□ 1.51
SMARCD2-206ENST00000577990 KIFC3Q9BVG8 833 aa24.5■■□□□ 1.51
SMARCD2-206ENST00000577990 FZD8Q9H461 694 aa24.5■■□□□ 1.51
SMARCD2-206ENST00000577990 ZDHHC9Q9Y397 364 aa24.5■■□□□ 1.51
SMARCD2-206ENST00000577990 PCDHB2Q9Y5E7 798 aa24.5■■□□□ 1.51
SMARCD2-206ENST00000577990 KIAA1671Q9BY89 1806 aa24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 B4GALT5O43286 388 aa24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 ARF4P18085 180 aaPredicted RBP24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 PEX3P56589 373 aa24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 MRPS5P82675 430 aaKnown RBP24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 DNM1Q05193 864 aaKnown RBP24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 RAD51AP2Q09MP3 1159 aa24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 DMP1Q13316 513 aaPredicted RBP24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 DHX8Q14562 1220 aaKnown RBP24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 MCM6Q14566 821 aa24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 MAPK6Q16659 721 aa24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 FAM187BQ17R55 369 aa24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 CLLU1OSQ5K130 101 aa24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 GPBP1Q86WP2 473 aa24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 LARP4BQ92615 738 aaKnown RBP24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 CASD1Q96PB1 797 aa24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 CCDC113Q9H0I3 377 aa24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 C17orf75Q9HAS0 396 aa24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 CFAP45Q9UL16 551 aa24.49■■□□□ 1.51
SMARCD2-206ENST00000577990 CCDC169A6NNP5 214 aa24.48■■□□□ 1.51
SMARCD2-206ENST00000577990 PRKCBP05771 671 aa24.48■■□□□ 1.51
SMARCD2-206ENST00000577990 MYH11P35749 1972 aa24.48■■□□□ 1.51
SMARCD2-206ENST00000577990 BMPR1AP36894 532 aa24.48■■□□□ 1.51
SMARCD2-206ENST00000577990 NPTX2P47972 431 aa24.48■■□□□ 1.51
SMARCD2-206ENST00000577990 EFNA5P52803 228 aa24.48■■□□□ 1.51
SMARCD2-206ENST00000577990 MYO7AQ13402 2215 aa24.48■■□□□ 1.51
SMARCD2-206ENST00000577990 ARSHQ5FYA8 562 aa24.48■■□□□ 1.51
SMARCD2-206ENST00000577990 KCNG4Q8TDN1 519 aa24.48■■□□□ 1.51
SMARCD2-206ENST00000577990 LPPQ93052 612 aa24.48■■□□□ 1.51
SMARCD2-206ENST00000577990 PGBD4Q96DM1 585 aa24.48■■□□□ 1.51
SMARCD2-206ENST00000577990 STK17AQ9UEE5 414 aa24.48■■□□□ 1.51
SMARCD2-206ENST00000577990 ATG2AQ2TAZ0 1938 aa24.47■■□□□ 1.51
SMARCD2-206ENST00000577990 CNTNAP2Q9UHC6 1331 aa24.47■■□□□ 1.51
SMARCD2-206ENST00000577990 NPHP3-ACAD11A0A0J9YXS1 232 aa24.47■■□□□ 1.51
SMARCD2-206ENST00000577990 C5orf67F2Z3F1 127 aa24.47■■□□□ 1.51
SMARCD2-206ENST00000577990 RB1P06400 928 aa24.47■■□□□ 1.51
SMARCD2-206ENST00000577990 LIG1P18858 919 aa24.47■■□□□ 1.51
SMARCD2-206ENST00000577990 RRAGBQ5VZM2 374 aa24.47■■□□□ 1.51
SMARCD2-206ENST00000577990 MRPL10Q7Z7H8 261 aaKnown RBP24.47■■□□□ 1.51
SMARCD2-206ENST00000577990 LRRC43Q8N309 656 aa24.47■■□□□ 1.51
SMARCD2-206ENST00000577990 HELQQ8TDG4 1101 aa24.47■■□□□ 1.51
SMARCD2-206ENST00000577990 SFI1A8K8P3 1242 aa24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 H3BNC9 293 aa24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 CUTAO60888 179 aa24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 PLS3P13797 630 aa24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 DDIT3P35638 169 aa24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 GPM6BQ13491 265 aa24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 PRPF4BQ13523 1007 aaKnown RBP24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 LONRF3Q496Y0 759 aa24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 SPOUT1Q5T280 376 aaKnown RBP24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 CCDC73Q6ZRK6 1079 aa24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 CNNM3Q8NE01 707 aa24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 RSPH1Q8WYR4 309 aa24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 C11orf84Q9BUA3 381 aaPredicted RBP24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 PLVAPQ9BX97 442 aa24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 EIF2AQ9BY44 585 aaKnown RBP24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 KMT5AQ9NQR1 393 aa24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 TYW1Q9NV66 732 aaKnown RBP24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 ODF2LQ9ULJ1 636 aa24.46■■□□□ 1.51
SMARCD2-206ENST00000577990 PHLPP2Q6ZVD8 1323 aa24.45■■□□□ 1.5
SMARCD2-206ENST00000577990 A0A1B0GUA9 196 aa24.45■■□□□ 1.5
SMARCD2-206ENST00000577990 ACKR2O00590 384 aa24.45■■□□□ 1.5
SMARCD2-206ENST00000577990 NCLP19338 710 aaKnown RBP24.45■■□□□ 1.5
SMARCD2-206ENST00000577990 CACNB1Q02641 598 aaPredicted RBP24.45■■□□□ 1.5
SMARCD2-206ENST00000577990 TMEM132AQ24JP5 1023 aa24.45■■□□□ 1.5
SMARCD2-206ENST00000577990 SLC27A1Q6PCB7 646 aa24.45■■□□□ 1.5
SMARCD2-206ENST00000577990 SPIRE2Q8WWL2 714 aa24.45■■□□□ 1.5
SMARCD2-206ENST00000577990 REEP2Q9BRK0 252 aa24.45■■□□□ 1.5
SMARCD2-206ENST00000577990 MRPL9Q9BYD2 267 aaKnown RBP24.45■■□□□ 1.5
SMARCD2-206ENST00000577990 LMCD1Q9NZU5 365 aa24.45■■□□□ 1.5
SMARCD2-206ENST00000577990 ARHGAP28Q9P2N2 729 aa24.45■■□□□ 1.5
SMARCD2-206ENST00000577990 HCSTQ9UBK5 93 aa24.45■■□□□ 1.5
SMARCD2-206ENST00000577990 KCNG1Q9UIX4 513 aa24.45■■□□□ 1.5
SMARCD2-206ENST00000577990 IPPQ9Y573 584 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms