RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 CCDC43Q96MW1 224 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PPP1R12CQ9BZL4 782 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 BLZF1Q9H2G9 400 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 DMDP11532 3685 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 NPHP3-ACAD11A0A0J9YXS1 232 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 RSPH10B2B2RC85 870 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 RSPH10BP0C881 870 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ATP2A2P16615 1042 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 CASP1P29466 404 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 NAMPTP43490 491 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 NCKAP1LP55160 1127 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TAP1Q03518 808 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PPP2R5AQ15172 486 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PUS10Q3MIT2 529 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ZNF658Q5TYW1 1059 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 EPM2AIP1Q7L775 607 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ZNF720Q7Z2F6 126 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TRMT1LQ7Z2T5 733 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 FAM126BQ8IXS8 530 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TMEM174Q8WUU8 243 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TRAPPC12Q8WVT3 735 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PRPF31Q8WWY3 499 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PSPC1Q8WXF1 523 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 VWCEQ96DN2 955 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ANP32EQ9BTT0 268 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 FUCA2Q9BTY2 467 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 SUCLA2Q9P2R7 463 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PRKAG3Q9UGI9 489 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 CHD8Q9HCK8 2581 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PLXNA3P51805 1871 aa12.29□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PPP1R37O75864 691 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 BMP6P22004 513 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 GLRA2P23416 452 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 CYP2C18P33260 490 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PPP1R2P41236 205 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ASIC1P78348 528 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ZNF200P98182 395 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 GTF2BQ00403 316 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 LAMTOR4Q0VGL1 99 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 COASYQ13057 564 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 DRP2Q13474 957 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ALCAMQ13740 583 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PCBP1Q15365 356 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PTGISQ16647 500 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TRIM71Q2Q1W2 868 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 HERC4Q5GLZ8 1057 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 FAM26DQ5JW98 314 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 FAM102BQ5T8I3 360 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PTCRAQ6ISU1 281 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 FOXR2Q6PJQ5 311 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ZNF410Q86VK4 478 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ZNF507Q8TCN5 953 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 CCDC47Q96A33 483 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 VTI1AQ96AJ9 217 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TMEM143Q96AN5 459 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 IRF2BPLQ9H1B7 796 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ADAMTS10Q9H324 1103 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TMEM134Q9H6X4 195 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 CERS4Q9HA82 394 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 GPRC5CQ9NQ84 441 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ARHGAP28Q9P2N2 729 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 MAN1B1Q9UKM7 699 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 SQORQ9Y6N5 450 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PHLPP2Q6ZVD8 1323 aa12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 COL4A4P53420 1690 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TRIP12Q14669 1992 aaPredicted RBP12.27□□□□□ -0.44
CDK5RAP3-204ENST00000577664 EVPLQ92817 2033 aa12.27□□□□□ -0.44
CDK5RAP3-204ENST00000577664 SFI1A8K8P3 1242 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 H0YCG3 227 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 EIF3DO15371 548 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 B4GALT4O60513 344 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 TBCAO75347 108 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 GPR32O75388 356 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 FAM13AO94988 1023 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 KRT18P05783 430 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 CYP2C9P11712 490 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ID4P47928 161 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 NPTX2P47972 431 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 SMTNP53814 917 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ZNF445P59923 1031 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 PTENP60484 403 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 IGBP1P78318 339 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ZP2Q05996 745 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 STK4Q13043 487 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 BMT2Q1RMZ1 405 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ZSCAN23Q3MJ62 389 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ODR4Q5SWX8 454 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 CDCA2Q69YH5 1023 aaPredicted RBP12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 RUFY4Q6ZNE9 571 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 LRRC71Q8N4P6 559 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 MYCT1Q8N699 235 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 MLKLQ8NB16 471 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 TMEM161BQ8NDZ6 487 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 BSNDQ8WZ55 320 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 HVCN1Q96D96 273 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 IFT74Q96LB3 600 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 POLR3FQ9H1D9 316 aaPredicted RBP12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 SUGCTQ9HAC7 445 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 IFT122Q9HBG6 1241 aa12.27□□□□□ -0.45
CDK5RAP3-204ENST00000577664 DNAH14Q0VDD8 3507 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms