RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 DISC1Q9NRI5 854 aa18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 BARHL2Q9NY43 387 aa18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 PRR5-ARHGAP8B1AHC4 643 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 WDR64B1ANS9 1081 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 ANHXE9PGG2 379 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 SPTLC1O15269 473 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 SGSM2O43147 1006 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 POMCP01189 267 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 SOD2P04179 222 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 DNM2P50570 870 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 RAB27AP51159 221 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 STARD6P59095 220 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 GPC5P78333 572 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 ARHGAP8P85298 464 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 SETQ01105 290 aaPredicted RBP18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 HTR4Q13639 388 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 UGCGQ16739 394 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 ZNF528Q3MIS6 628 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 PALB2Q86YC2 1186 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 PHKBQ93100 1093 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 CHAMP1Q96JM3 812 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 TMEM175Q9BSA9 504 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 RPP25Q9BUL9 199 aaKnown RBP18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 RHOBTB2Q9BYZ6 727 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 INO80BQ9C086 356 aaPredicted RBP18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 USP18Q9UMW8 372 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 SSX2IPQ9Y2D8 614 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 PRG3Q9Y2Y8 225 aaPredicted RBP18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 PCDHB2Q9Y5E7 798 aa18.33■□□□□ 0.52
CTDNEP1-211ENST00000575783 CHMP2AO43633 222 aa18.32■□□□□ 0.52
CTDNEP1-211ENST00000575783 GAS2O43903 313 aaKnown RBP18.32■□□□□ 0.52
CTDNEP1-211ENST00000575783 LMNB2Q03252 620 aa18.32■□□□□ 0.52
CTDNEP1-211ENST00000575783 UBXN2BQ14CS0 331 aa18.32■□□□□ 0.52
CTDNEP1-211ENST00000575783 MTERF2Q49AM1 385 aa18.32■□□□□ 0.52
CTDNEP1-211ENST00000575783 AGMOQ6ZNB7 445 aa18.32■□□□□ 0.52
CTDNEP1-211ENST00000575783 RHPN2Q8IUC4 686 aa18.32■□□□□ 0.52
CTDNEP1-211ENST00000575783 CRYGNQ8WXF5 182 aa18.32■□□□□ 0.52
CTDNEP1-211ENST00000575783 SH2D3AQ9BRG2 576 aa18.32■□□□□ 0.52
CTDNEP1-211ENST00000575783 NT5C3AQ9H0P0 336 aa18.32■□□□□ 0.52
CTDNEP1-211ENST00000575783 KANSL3Q9P2N6 904 aa18.32■□□□□ 0.52
CTDNEP1-211ENST00000575783 FBXO4Q9UKT5 387 aa18.32■□□□□ 0.52
CTDNEP1-211ENST00000575783 MTF2Q9Y483 593 aaPredicted RBP18.32■□□□□ 0.52
CTDNEP1-211ENST00000575783 KANSL1LA0AUZ9 987 aa18.31■□□□□ 0.52
CTDNEP1-211ENST00000575783 OR1G1P47890 313 aa18.31■□□□□ 0.52
CTDNEP1-211ENST00000575783 KSR1Q8IVT5 923 aa18.31■□□□□ 0.52
CTDNEP1-211ENST00000575783 BORCS6Q96GS4 357 aa18.31■□□□□ 0.52
CTDNEP1-211ENST00000575783 HERC2P3Q9BVR0 1158 aa18.31■□□□□ 0.52
CTDNEP1-211ENST00000575783 RSAD1Q9HA92 442 aa18.31■□□□□ 0.52
CTDNEP1-211ENST00000575783 RBM28Q9NW13 759 aaKnown RBP18.31■□□□□ 0.52
CTDNEP1-211ENST00000575783 SUCLA2Q9P2R7 463 aaPredicted RBP18.31■□□□□ 0.52
CTDNEP1-211ENST00000575783 SEPT9Q9UHD8 586 aaPredicted RBP18.31■□□□□ 0.52
CTDNEP1-211ENST00000575783 SMG5Q9UPR3 1016 aaKnown RBP18.31■□□□□ 0.52
CTDNEP1-211ENST00000575783 PCDHGA2Q9Y5H1 932 aa18.31■□□□□ 0.52
CTDNEP1-211ENST00000575783 CHD6Q8TD26 2715 aa18.31■□□□□ 0.52
CTDNEP1-211ENST00000575783 CHD8Q9HCK8 2581 aa18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 TMEM150BA6NC51 233 aa18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 FAM170BA6NMN3 283 aa18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 hCG_1984214I3L0E3 225 aa18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 ADAMTS3O15072 1205 aa18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 GLUD2P49448 558 aa18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 FUT2Q10981 343 aa18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 TARBP2Q15633 366 aaKnown RBP18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 PARM1Q6UWI2 310 aa18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 GLYCTKQ8IVS8 523 aa18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 ZNF713Q8N859 430 aaPredicted RBP18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 FGF14Q92915 247 aa18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 NLRP4Q96MN2 994 aa18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 RTKNQ9BST9 563 aa18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 PLEKHA4Q9H4M7 779 aa18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 RXFP1Q9HBX9 757 aa18.3■□□□□ 0.52
CTDNEP1-211ENST00000575783 TGM5O43548 720 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 CD72P21854 359 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 FSHRP23945 695 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 AAMPQ13685 434 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 RTN1Q16799 776 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 SLC44A4Q53GD3 710 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 ZNF410Q86VK4 478 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 SGMS1Q86VZ5 419 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 HDAC7Q8WUI4 952 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 B3GALT6Q96L58 329 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 PRKD2Q9BZL6 878 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 MARCH5Q9NX47 278 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 ZSCAN32Q9NX65 697 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 C2orf16Q68DN1 1984 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 CACNA1IQ9P0X4 2223 aa18.29■□□□□ 0.52
CTDNEP1-211ENST00000575783 ADRB1P08588 477 aa18.28■□□□□ 0.52
CTDNEP1-211ENST00000575783 MLF2Q15773 248 aaPredicted RBP18.28■□□□□ 0.52
CTDNEP1-211ENST00000575783 APOA5Q6Q788 366 aa18.28■□□□□ 0.52
CTDNEP1-211ENST00000575783 TSSK4Q6SA08 328 aa18.28■□□□□ 0.52
CTDNEP1-211ENST00000575783 MRPL10Q7Z7H8 261 aaKnown RBP18.28■□□□□ 0.52
CTDNEP1-211ENST00000575783 ZDHHC7Q9NXF8 308 aa18.28■□□□□ 0.52
CTDNEP1-211ENST00000575783 F8W810 466 aa18.27■□□□□ 0.52
CTDNEP1-211ENST00000575783 SLC27A2O14975 620 aa18.27■□□□□ 0.52
CTDNEP1-211ENST00000575783 GAS7O60861 476 aa18.27■□□□□ 0.52
CTDNEP1-211ENST00000575783 DSG1Q02413 1049 aa18.27■□□□□ 0.52
CTDNEP1-211ENST00000575783 REXO1Q8N1G1 1221 aaKnown RBP18.27■□□□□ 0.52
CTDNEP1-211ENST00000575783 ZBTB44Q8NCP5 570 aa18.27■□□□□ 0.52
CTDNEP1-211ENST00000575783 EXOC6Q8TAG9 804 aa18.27■□□□□ 0.52
CTDNEP1-211ENST00000575783 GJA10Q969M2 543 aa18.27■□□□□ 0.52
CTDNEP1-211ENST00000575783 DDX23Q9BUQ8 820 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms