RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ZSCAN22P10073 491 aaPredicted RBP14.65□□□□□ -0.06
RPAIN-216ENST00000575599 SKIP12755 728 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 NAMPTP43490 491 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 NCBP1Q09161 790 aaKnown RBP14.65□□□□□ -0.06
RPAIN-216ENST00000575599 RAD51AP2Q09MP3 1159 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 PKP1Q13835 747 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 KARSQ15046 597 aaKnown RBP14.65□□□□□ -0.06
RPAIN-216ENST00000575599 PPP2R5AQ15172 486 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 PCBP1Q15365 356 aaKnown RBP eCLIP14.65□□□□□ -0.06
RPAIN-216ENST00000575599 CDCA2Q69YH5 1023 aaPredicted RBP14.65□□□□□ -0.06
RPAIN-216ENST00000575599 RINT1Q6NUQ1 792 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 NOTUMQ6P988 496 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 LRRC43Q8N309 656 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 CLIC6Q96NY7 704 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 CASD1Q96PB1 797 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 TRAIPQ9BWF2 469 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 C2orf40Q9H1Z8 148 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 TYW1Q9NV66 732 aaKnown RBP14.65□□□□□ -0.06
RPAIN-216ENST00000575599 PCDHB2Q9Y5E7 798 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 ATP6V1DQ9Y5K8 247 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 PRRC2BQ5JSZ5 2229 aaKnown RBP14.64□□□□□ -0.07
RPAIN-216ENST00000575599 MEIS3P2A8K0S8 358 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 SLC26A4O43511 780 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 F13A1P00488 732 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 RB1P06400 928 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 PLA2G4BP0C869 781 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 ARF4P18085 180 aaPredicted RBP14.64□□□□□ -0.07
RPAIN-216ENST00000575599 PLCG1P19174 1290 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 POU3F3P20264 500 aaPredicted RBP14.64□□□□□ -0.07
RPAIN-216ENST00000575599 AXLP30530 894 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 DHX8Q14562 1220 aaKnown RBP14.64□□□□□ -0.07
RPAIN-216ENST00000575599 STK38Q15208 465 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 SKIV2LQ15477 1246 aaKnown RBP14.64□□□□□ -0.07
RPAIN-216ENST00000575599 AMHR2Q16671 573 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 PTPROQ16827 1216 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 TMEM132AQ24JP5 1023 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 UBXN11Q5T124 520 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 C1orf186Q6ZWK4 172 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 CDR2LQ86X02 465 aaPredicted RBP14.64□□□□□ -0.07
RPAIN-216ENST00000575599 SYT2Q8N9I0 419 aaPredicted RBP14.64□□□□□ -0.07
RPAIN-216ENST00000575599 EPSTI1Q96J88 318 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 ZNF396Q96N95 335 aaPredicted RBP14.64□□□□□ -0.07
RPAIN-216ENST00000575599 PLVAPQ9BX97 442 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 EIF2AQ9BY44 585 aaKnown RBP14.64□□□□□ -0.07
RPAIN-216ENST00000575599 INPP5FQ9Y2H2 1132 aa14.64□□□□□ -0.07
RPAIN-216ENST00000575599 SRPRBQ9Y5M8 271 aaKnown RBP14.64□□□□□ -0.07
RPAIN-216ENST00000575599 CCDC169A6NNP5 214 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 GRM6O15303 877 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 BRD1O95696 1058 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 PRKCBP05771 671 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 NASPP49321 788 aaPredicted RBP14.63□□□□□ -0.07
RPAIN-216ENST00000575599 SLC12A3P55017 1021 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 PEX3P56589 373 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 DMP1Q13316 513 aaPredicted RBP14.63□□□□□ -0.07
RPAIN-216ENST00000575599 SLC39A14Q15043 492 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 MAPK6Q16659 721 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 USP49Q70CQ1 688 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 DAW1Q8N136 415 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 KCTD17Q8N5Z5 321 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 KRI1Q8N9T8 703 aaKnown RBP14.63□□□□□ -0.07
RPAIN-216ENST00000575599 KLHL23Q8NBE8 558 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 SLC17A8Q8NDX2 589 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 SYMPKQ92797 1274 aaKnown RBP14.63□□□□□ -0.07
RPAIN-216ENST00000575599 PGBD4Q96DM1 585 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 CCDC51Q96ER9 411 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 DRC1Q96MC2 740 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 APOL6Q9BWW8 343 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 TRIM6Q9C030 488 aaPredicted RBP14.63□□□□□ -0.07
RPAIN-216ENST00000575599 CWH43Q9H720 699 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 ALG13Q9NP73 1137 aaKnown RBP14.63□□□□□ -0.07
RPAIN-216ENST00000575599 PRDM6Q9NQX0 595 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 AAASQ9NRG9 546 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 PRMT7Q9NVM4 692 aaPredicted RBP14.63□□□□□ -0.07
RPAIN-216ENST00000575599 LMCD1Q9NZU5 365 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 TFIP11Q9UBB9 837 aaKnown RBP14.63□□□□□ -0.07
RPAIN-216ENST00000575599 PCDHB12Q9Y5F1 795 aa14.63□□□□□ -0.07
RPAIN-216ENST00000575599 NPHP3-ACAD11A0A0J9YXS1 232 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 SFI1A8K8P3 1242 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 ZNF623O75123 536 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 LAG3P18627 525 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 TXLNAP40222 546 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 MAPK7Q13164 816 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 PRPF4BQ13523 1007 aaKnown RBP14.62□□□□□ -0.07
RPAIN-216ENST00000575599 GLB1LQ6UWU2 654 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 LRRC55Q6ZSA7 311 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 GPBP1Q86WP2 473 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.62□□□□□ -0.07
RPAIN-216ENST00000575599 THNSL1Q8IYQ7 743 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 COLGALT1Q8NBJ5 622 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 LRRC15Q8TF66 581 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 RAD54LQ92698 747 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 MRPL38Q96DV4 380 aaKnown RBP14.62□□□□□ -0.07
RPAIN-216ENST00000575599 PRIMPOLQ96LW4 560 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 MRPL9Q9BYD2 267 aaKnown RBP14.62□□□□□ -0.07
RPAIN-216ENST00000575599 CCSER1Q9C0I3 900 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 FZD8Q9H461 694 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 USP20Q9Y2K6 914 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 HES2Q9Y543 173 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 IPPQ9Y573 584 aa14.62□□□□□ -0.07
RPAIN-216ENST00000575599 CNTNAP2Q9UHC6 1331 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms