RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 DNAJB4Q9UDY4 337 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 BRPF3Q9ULD4 1205 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 ZFP37Q9Y6Q3 630 aaPredicted RBP10.11□□□□□ -0.79
SMG6-218ENST00000575454 R4GN57 208 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 MYH7BA7E2Y1 1941 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 CLUHO75153 1309 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 KLF18A0A0U1RQI7 1052 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 MED19A0JLT2 244 aaPredicted RBP10.1□□□□□ -0.79
SMG6-218ENST00000575454 NRP1O14786 923 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 MSH4O15457 936 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 TEX28O15482 410 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 CHMP2AO43633 222 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 MAFO75444 373 aaPredicted RBP10.1□□□□□ -0.79
SMG6-218ENST00000575454 PAPLNO95428 1278 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 SP9P0CG40 484 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 FGD1P98174 961 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 EXOSC10Q01780 885 aaKnown RBP10.1□□□□□ -0.79
SMG6-218ENST00000575454 CREMQ03060 361 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 NCBP1Q09161 790 aaKnown RBP10.1□□□□□ -0.79
SMG6-218ENST00000575454 KRT32Q14532 448 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 ZNF528Q3MIS6 628 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 LONRF3Q496Y0 759 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 MTERF2Q49AM1 385 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 LRCH2Q5VUJ6 765 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 DCLRE1AQ6PJP8 1040 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 ZNF280BQ86YH2 543 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 GPR65Q8IYL9 337 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 RSAD2Q8WXG1 361 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 RIN2Q8WYP3 895 aaPredicted RBP10.1□□□□□ -0.79
SMG6-218ENST00000575454 SMG7Q92540 1137 aaKnown RBP10.1□□□□□ -0.79
SMG6-218ENST00000575454 SLC5A5Q92911 643 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 PHKBQ93100 1093 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 LENG9Q96B70 501 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 ESYT1Q9BSJ8 1104 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 HERC2P3Q9BVR0 1158 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 PIDD1Q9HB75 910 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 RXFP1Q9HBX9 757 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 SLC2A4RGQ9NR83 387 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMG6-218ENST00000575454 AGPAT5Q9NUQ2 364 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 ZDHHC7Q9NXF8 308 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 SEPT9Q9UHD8 586 aaPredicted RBP10.1□□□□□ -0.79
SMG6-218ENST00000575454 CA14Q9ULX7 337 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 PPME1Q9Y570 386 aa10.1□□□□□ -0.79
SMG6-218ENST00000575454 DDX11L8A8MPP1 907 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 ANHXE9PGG2 379 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 C2CD2LO14523 706 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 SPTLC1O15269 473 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 INPPL1O15357 1258 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 PRPF3O43395 683 aaKnown RBP10.09□□□□□ -0.79
SMG6-218ENST00000575454 DKC1O60832 514 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMG6-218ENST00000575454 KINO60870 393 aaKnown RBP10.09□□□□□ -0.79
SMG6-218ENST00000575454 N4BP1O75113 896 aaKnown RBP10.09□□□□□ -0.79
SMG6-218ENST00000575454 DDHD2O94830 711 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 DCNP07585 359 aaKnown RBP10.09□□□□□ -0.79
SMG6-218ENST00000575454 LAMP2P13473 410 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 CDC27P30260 824 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 ADD1P35611 737 aaKnown RBP10.09□□□□□ -0.79
SMG6-218ENST00000575454 GLUD2P49448 558 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 DRP2Q13474 957 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 COL9A3Q14050 684 aaPredicted RBP10.09□□□□□ -0.79
SMG6-218ENST00000575454 PCBP1Q15365 356 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMG6-218ENST00000575454 UGCGQ16739 394 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 TSGA10IPQ3SY00 556 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 SPECC1Q5M775 1068 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 AGMOQ6ZNB7 445 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 MIER3Q7Z3K6 550 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 SRGAP1Q7Z6B7 1085 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 GPR152Q8TDT2 470 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 SLC7A3Q8WY07 619 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 SECISBP2LQ93073 1101 aaKnown RBP10.09□□□□□ -0.79
SMG6-218ENST00000575454 NLRP4Q96MN2 994 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 BCO2Q9BYV7 579 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 NT5C3AQ9H0P0 336 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 UNC45AQ9H3U1 944 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 FAM217BQ9NTX9 383 aaPredicted RBP10.09□□□□□ -0.79
SMG6-218ENST00000575454 DLGAP2Q9P1A6 1054 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 NAP1L2Q9ULW6 460 aaPredicted RBP10.09□□□□□ -0.79
SMG6-218ENST00000575454 PKD1L2Q7Z442 2459 aa10.09□□□□□ -0.79
SMG6-218ENST00000575454 BAZ2BQ9UIF8 2168 aaKnown RBP10.08□□□□□ -0.8
SMG6-218ENST00000575454 MEIS3P2A8K0S8 358 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 ASAP2O43150 1006 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 GAS2O43903 313 aaKnown RBP10.08□□□□□ -0.8
SMG6-218ENST00000575454 PSMD10O75832 226 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 NCLP19338 710 aaKnown RBP10.08□□□□□ -0.8
SMG6-218ENST00000575454 MAGEA9P43362 315 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 OR1G1P47890 313 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 STARD6P59095 220 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 PSMC5P62195 406 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 DSG1Q02413 1049 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 Q4G0T1 1027 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 KIAA0319Q5VV43 1072 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 PJA1Q8NG27 643 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 CCDC51Q96ER9 411 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 MYADMQ96S97 322 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 CEP89Q96ST8 783 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 COLEC11Q9BWP8 271 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 PRKD2Q9BZL6 878 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 IFT122Q9HBG6 1241 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 FBXO4Q9UKT5 387 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms