RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 VMP1Q96GC9 406 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 BIRC8Q96P09 236 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 PPP1R10Q96QC0 940 aaKnown RBP8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 HEPHQ9BQS7 1158 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 CRNKL1Q9BZJ0 848 aaKnown RBP8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 TLE6Q9H808 572 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 CNGB3Q9NQW8 809 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 INTS9Q9NV88 658 aaKnown RBP8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 PAG1Q9NWQ8 432 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 KLHL14Q9P2G3 628 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 STX18Q9P2W9 335 aaKnown RBP8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 STX8Q9UNK0 236 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 SCAF8Q9UPN6 1271 aaKnown RBP8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 REXO2Q9Y3B8 237 aaKnown RBP8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 SQORQ9Y6N5 450 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 CPS1P31327 1500 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 NWD1Q149M9 1564 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 KIF28PB7ZC32 967 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 HGSO14964 777 aaPredicted RBP8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 AP1G1O43747 822 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 SGTAO43765 313 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 KRT6AP02538 564 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 KRT6BP04259 564 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 FAM153BP0C7A2 387 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 CHN1P15882 459 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 PRKACBP22694 351 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 GTF2H1P32780 548 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 FXR1P51114 621 aaKnown RBP eCLIP8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 XIAPP98170 497 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 DSG1Q02413 1049 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 KRT71Q3SY84 523 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 FAM153CQ494X1 144 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 TSHZ3Q63HK5 1081 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 INTS8Q75QN2 995 aaKnown RBP8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 SPARTQ8N0X7 666 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 LILRB1Q8NHL6 650 aaPredicted RBP8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 NKX2-3Q8TAU0 364 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 ATL1Q8WXF7 558 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 UTP4Q969X6 686 aaKnown RBP8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 NUP88Q99567 741 aaPredicted RBP8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 DNAJC7Q99615 494 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 UBAC1Q9BSL1 405 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 STK33Q9BYT3 514 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 CEP44Q9C0F1 390 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 POLD4Q9HCU8 107 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 TBC1D23Q9NUY8 699 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 FAM153AQ9UHL3 310 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 SPG7Q9UQ90 795 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 ZNF652Q9Y2D9 606 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 TELO2Q9Y4R8 837 aa8.52□□□□□ -1.05
TOM1L1-220ENST00000575333 SALL1Q9NSC2 1324 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 XRN1Q8IZH2 1706 aaKnown RBP8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 CFAP69A5D8W1 941 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 CCDC169A6NNP5 214 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 CENPBD1B2RD01 187 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 GOLGA8MH3BSY2 632 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 ZNF185O15231 689 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 SNX2O60749 519 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 AGTP01019 485 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 MYBP10242 640 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 ETS2P15036 469 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 MARK3P27448 753 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 GNA11P29992 359 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 CETN2P41208 172 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 RPL5P46777 297 aaKnown RBP8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 BCAP31P51572 246 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 HSD17B4P51659 736 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 HERVK_113P62684 666 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 COX10Q12887 443 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 MORC3Q14149 939 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 TMTC4Q5T4D3 741 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 C6orf183Q5T699 404 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 DENND2CQ68D51 928 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 NIPAL1Q6NVV3 410 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 CCDC62Q6P9F0 684 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 CYP2U1Q7Z449 544 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 C14orf80Q86SX3 495 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 TNIP2Q8NFZ5 429 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 CPLX3Q8WVH0 158 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 CDKL2Q92772 493 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 CEP295NLQ96MC4 621 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 UQCC2Q9BRT2 126 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 HAUS8Q9BT25 410 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 TRIM55Q9BYV6 548 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 IMPG2Q9BZV3 1241 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 DDX47Q9H0S4 455 aaKnown RBP8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 AASDHPPTQ9NRN7 309 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 KRT82Q9NSB4 513 aa8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 PPP1R1BQ9UD71 204 aaPredicted RBP8.51□□□□□ -1.05
TOM1L1-220ENST00000575333 MYH7BA7E2Y1 1941 aa8.5□□□□□ -1.05
TOM1L1-220ENST00000575333 FUOMA2VDF0 154 aa8.5□□□□□ -1.05
TOM1L1-220ENST00000575333 ANKRD34BA5PLL1 514 aa8.5□□□□□ -1.05
TOM1L1-220ENST00000575333 A6NJR5 290 aa8.5□□□□□ -1.05
TOM1L1-220ENST00000575333 A8MXQ7 604 aa8.5□□□□□ -1.05
TOM1L1-220ENST00000575333 H0YC42 278 aa8.5□□□□□ -1.05
TOM1L1-220ENST00000575333 CES2O00748 559 aa8.5□□□□□ -1.05
TOM1L1-220ENST00000575333 CPLX1O14810 134 aa8.5□□□□□ -1.05
TOM1L1-220ENST00000575333 PFDN6O15212 129 aa8.5□□□□□ -1.05
TOM1L1-220ENST00000575333 ZNF862O60290 1169 aa8.5□□□□□ -1.05
TOM1L1-220ENST00000575333 ESRRBO95718 433 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms