RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 EYSQ5T1H1 3165 aa22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 CCDC169A6NNP5 214 aa22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 PRKCBP05771 671 aa22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 GUCY2CP25092 1073 aa22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 TXLNAP40222 546 aa22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 PEX3P56589 373 aa22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 DMP1Q13316 513 aaPredicted RBP22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 DHX8Q14562 1220 aaKnown RBP22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 MAPK6Q16659 721 aa22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 TMEM132AQ24JP5 1023 aa22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 PPP4R3CPQ6ZMV5 832 aa22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 USP49Q70CQ1 688 aa22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 DAW1Q8N136 415 aa22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 LINC00301Q8NCQ3 95 aa22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 SLC17A8Q8NDX2 589 aa22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 EIF2AQ9BY44 585 aaKnown RBP22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 TRIM6Q9C030 488 aaPredicted RBP22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 KCND2Q9NZV8 630 aa22.87■■□□□ 1.25
HCFC1R1-208ENST00000575214 NLRC5Q86WI3 1866 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 MEIS3P2A8K0S8 358 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 SPTLC2O15270 562 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 MAPK7Q13164 816 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 FAM187BQ17R55 369 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 GLB1LQ6UWU2 654 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 CDR2LQ86X02 465 aaPredicted RBP22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 LRRC15Q8TF66 581 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 RAD54LQ92698 747 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 P2RX5Q93086 422 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 MRPL38Q96DV4 380 aaKnown RBP22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 MRPL9Q9BYD2 267 aaKnown RBP22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 FZD8Q9H461 694 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 CWH43Q9H720 699 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 BLOC1S4Q9NUP1 217 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 DAXXQ9UER7 740 aaPredicted RBP22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 CCDC39Q9UFE4 941 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 INPP5FQ9Y2H2 1132 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 PCDHB12Q9Y5F1 795 aa22.86■■□□□ 1.25
HCFC1R1-208ENST00000575214 FNDC1Q4ZHG4 1894 aaPredicted RBP22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 SFI1A8K8P3 1242 aa22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 YEATS4O95619 227 aa22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 LAG3P18627 525 aa22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 NPTX2P47972 431 aa22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 EFNA5P52803 228 aa22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 PRPF4BQ13523 1007 aaKnown RBP22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 MCM6Q14566 821 aa22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 SKIV2LQ15477 1246 aaKnown RBP22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 NAALADL2Q58DX5 795 aa22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 LRRC55Q6ZSA7 311 aa22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 GPBP1Q86WP2 473 aa22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 KLHL23Q8NBE8 558 aa22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 CNNM3Q8NE01 707 aa22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 CCDC113Q9H0I3 377 aa22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 IPPQ9Y573 584 aa22.85■■□□□ 1.25
HCFC1R1-208ENST00000575214 CNTNAP2Q9UHC6 1331 aa22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 NPHP3-ACAD11A0A0J9YXS1 232 aa22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 GRM6O15303 877 aa22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 CSPG5O95196 566 aa22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 NCLP19338 710 aaKnown RBP22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 CACNB1Q02641 598 aaPredicted RBP22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 SLC27A1Q6PCB7 646 aa22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 AGMOQ6ZNB7 445 aa22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 MRPL10Q7Z7H8 261 aaKnown RBP22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 COLGALT1Q8NBJ5 622 aa22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 SMG8Q8ND04 991 aaKnown RBP22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 RSPH1Q8WYR4 309 aa22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 LARP4BQ92615 738 aaKnown RBP22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 RSAD1Q9HA92 442 aa22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 C17orf75Q9HAS0 396 aa22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 ALG13Q9NP73 1137 aaKnown RBP22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 KMT5AQ9NQR1 393 aa22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 PRRC2BQ5JSZ5 2229 aaKnown RBP22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 UNC80Q8N2C7 3258 aa22.84■■□□□ 1.25
HCFC1R1-208ENST00000575214 A0A1B0GUA9 196 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 ACKR2O00590 384 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 PPP6R2O75170 966 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 NPTXRO95502 500 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 ITGB1P05556 798 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 ITGA4P13612 1032 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 ARSHQ5FYA8 562 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 NOMO2Q5JPE7 1267 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 THNSL1Q8IYQ7 743 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 HACE1Q8IYU2 909 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 URGCPQ8TCY9 931 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 APOL6Q9BWW8 343 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 LMAN2LQ9H0V9 348 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 PLAGL2Q9UPG8 496 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 HES2Q9Y543 173 aa22.83■■□□□ 1.25
HCFC1R1-208ENST00000575214 CUL9Q8IWT3 2517 aa22.82■■□□□ 1.24
HCFC1R1-208ENST00000575214 TTLL13PA6NNM8 815 aa22.82■■□□□ 1.24
HCFC1R1-208ENST00000575214 K7ERI5 159 aa22.82■■□□□ 1.24
HCFC1R1-208ENST00000575214 N4BP3O15049 544 aa22.82■■□□□ 1.24
HCFC1R1-208ENST00000575214 OFD1O75665 1012 aa22.82■■□□□ 1.24
HCFC1R1-208ENST00000575214 KRT18P05783 430 aaKnown RBP22.82■■□□□ 1.24
HCFC1R1-208ENST00000575214 PLS3P13797 630 aa22.82■■□□□ 1.24
HCFC1R1-208ENST00000575214 CSPP1Q1MSJ5 1256 aa22.82■■□□□ 1.24
HCFC1R1-208ENST00000575214 RRAGBQ5VZM2 374 aa22.82■■□□□ 1.24
HCFC1R1-208ENST00000575214 ZNF558Q96NG5 402 aa22.82■■□□□ 1.24
HCFC1R1-208ENST00000575214 NXF3Q9H4D5 531 aaKnown RBP22.82■■□□□ 1.24
HCFC1R1-208ENST00000575214 STK17AQ9UEE5 414 aa22.82■■□□□ 1.24
HCFC1R1-208ENST00000575214 USP20Q9Y2K6 914 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms