RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	NOD1	Q9Y239	953 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	SI	P14410	1827 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	ACKR2	O00590	384 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	KIAA0391	O15091	583 aa	Known RBP	13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	PRKCB	P05771	671 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	MRE11	P49959	708 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	MRPS6	P82932	125 aa	Known RBP	13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	MBTD1	Q05BQ5	628 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	FAM26D	Q5JW98	314 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	SLFN12L	Q6IEE8	588 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	ZPBP2	Q6X784	338 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	SLC39A5	Q6ZMH5	540 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	FILIP1	Q7Z7B0	1213 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	FAM114A1	Q8IWE2	563 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	SCLT1	Q96NL6	688 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	TOX2	Q96NM4	488 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	SRRT	Q9BXP5	876 aa	Known RBP	13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	MRPL4	Q9BYD3	311 aa	Known RBP	13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	CELF4	Q9BZC1	486 aa	Known RBP	13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	GRPEL1	Q9HAV7	217 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	AGPAT3	Q9NRZ7	376 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	FANCL	Q9NW38	375 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	DMAC2	Q9NW81	257 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	STYXL1	Q9Y6J8	313 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	ZMYM2	Q9UBW7	1377 aa		13.05	□□□□□ -0.32
PRPF8-212	ENST00000575116	INO80B-WBP1	J3KQ70	363 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	HNRNPDL	O14979	420 aa	Known RBP	13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	CETN3	O15182	167 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	TLR3	O15455	904 aa	Known RBP	13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	B4GALT4	O60513	344 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	GNA14	O95837	355 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	CD4	P01730	458 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	DARS	P14868	501 aa	Known RBP	13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	ZNF18	P17022	549 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	GART	P22102	1010 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	EIF4B	P23588	611 aa	Known RBP	13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	AXL	P30530	894 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	SPAG1	Q07617	926 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	RBL2	Q08999	1139 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	NCBP1	Q09161	790 aa	Known RBP	13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	ADAM9	Q13443	819 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	SNX17	Q15036	470 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	KIZ	Q2M2Z5	673 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	TRIM71	Q2Q1W2	868 aa	Known RBP	13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	CDKAL1	Q5VV42	579 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	ANKRD33	Q7Z3H0	272 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	CCDC155	Q8N6L0	562 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	HSD3B7	Q9H2F3	369 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	SAMSN1	Q9NSI8	373 aa	Known RBP	13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	TRMT13	Q9NUP7	481 aa	Known RBP	13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	TRPV2	Q9Y5S1	764 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	SQOR	Q9Y6N5	450 aa		13.04	□□□□□ -0.32
PRPF8-212	ENST00000575116	LRRC10B	A6NIK2	292 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	NR3C1	P04150	777 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	CDK11B	P21127	795 aa	Known RBP	13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	NR2F2	P24468	414 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	LIG4	P49917	911 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	MGAT3	Q09327	533 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	PRPF4B	Q13523	1007 aa	Known RBP	13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	LRRC55	Q6ZSA7	311 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	TSHZ1	Q6ZSZ6	1077 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	FAM126B	Q8IXS8	530 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	CAGE1	Q8TC20	777 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	DHX38	Q92620	1227 aa	Known RBP	13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	BICD1	Q96G01	975 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	ACO2	Q99798	780 aa	Known RBP	13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	MKNK1	Q9BUB5	465 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	TRPV6	Q9H1D0	765 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	C11orf49	Q9H6J7	331 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	MINDY3	Q9H8M7	445 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	CDHR5	Q9HBB8	845 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	TNFSF13B	Q9Y275	285 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	CDY2A	Q9Y6F7	541 aa		13.03	□□□□□ -0.32
PRPF8-212	ENST00000575116	HTT	P42858	3142 aa		13.02	□□□□□ -0.32
PRPF8-212	ENST00000575116	DCDC2C	A8MYV0	355 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	ANKRD63	C9JTQ0	380 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	CLIC2	O15247	247 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	MAPK13	O15264	365 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	SLC16A3	O15427	465 aa	Known RBP	13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	TOM1L1	O75674	476 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	ERLIN2	O94905	339 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	LDHA	P00338	332 aa	Known RBP	13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	IQCF3	P0C7M6	154 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	SFPQ	P23246	707 aa	Known RBP eCLIP	13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	EEF1G	P26641	437 aa	Known RBP	13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	THPO	P40225	353 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	MARS	P56192	900 aa	Known RBP	13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	TMEM62	Q0P6H9	643 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	BFSP2	Q13515	415 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	AMHR2	Q16671	573 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	ARMCX5	Q6P1M9	558 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	SLC39A4	Q6P5W5	647 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	NECAB2	Q7Z6G3	386 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	IRF2BP1	Q8IU81	584 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	USP38	Q8NB14	1042 aa		13.02	□□□□□ -0.33
PRPF8-212	ENST00000575116	ANKRD20A12P	Q8NF67	263 aa		13.02	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms