RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 FAM187BQ17R55 369 aa15.96■□□□□ 0.15
NPLOC4-218ENST00000574964 KMT5BQ4FZB7 885 aa15.96■□□□□ 0.15
NPLOC4-218ENST00000574964 TWF2Q6IBS0 349 aaKnown RBP15.96■□□□□ 0.15
NPLOC4-218ENST00000574964 CHRDL2Q6WN34 429 aa15.96■□□□□ 0.15
NPLOC4-218ENST00000574964 PPP4R3CPQ6ZMV5 832 aa15.96■□□□□ 0.15
NPLOC4-218ENST00000574964 TMEM161BQ8NDZ6 487 aa15.96■□□□□ 0.15
NPLOC4-218ENST00000574964 SMARCE1Q969G3 411 aa15.96■□□□□ 0.15
NPLOC4-218ENST00000574964 BICD1Q96G01 975 aa15.96■□□□□ 0.15
NPLOC4-218ENST00000574964 ADAM2Q99965 735 aa15.96■□□□□ 0.15
NPLOC4-218ENST00000574964 MRPL4Q9BYD3 311 aaKnown RBP15.96■□□□□ 0.15
NPLOC4-218ENST00000574964 CHST12Q9NRB3 414 aa15.96■□□□□ 0.15
NPLOC4-218ENST00000574964 OLFML3Q9NRN5 406 aa15.96■□□□□ 0.15
NPLOC4-218ENST00000574964 AGPAT5Q9NUQ2 364 aa15.96■□□□□ 0.15
NPLOC4-218ENST00000574964 PCDHB13Q9Y5F0 798 aa15.96■□□□□ 0.15
NPLOC4-218ENST00000574964 RBAK-RBAKDNI3L0D1 243 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 KLRC4O43908 158 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 TSPAN1O60635 241 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 PSMD2Q13200 908 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 ALCAMQ13740 583 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 CAMK4Q16566 473 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 NOTUMQ6P988 496 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 ZNF720Q7Z2F6 126 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 ELOA2Q8IYF1 753 aaPredicted RBP15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 HERVK_113Q902F9 699 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 HPS3Q969F9 1004 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 HVCN1Q96D96 273 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 VWCEQ96DN2 955 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 CPB2Q96IY4 423 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 RNPC3Q96LT9 517 aaKnown RBP15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 CCDC113Q9H0I3 377 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 NUP62CLQ9H1M0 184 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 TMX1Q9H3N1 280 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 C1orf112Q9NSG2 853 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 RMND1Q9NWS8 449 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 EXOC7Q9UPT5 735 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 CITO14578 2027 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 TRIP11Q15643 1979 aa15.95■□□□□ 0.14
NPLOC4-218ENST00000574964 ENPP3O14638 875 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 B4GALT5O43286 388 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 AMHP03971 560 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 ARF4P18085 180 aaPredicted RBP15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 BMP8BP34820 402 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 MATR3P43243 847 aaKnown RBP eCLIP15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 GTF2BQ00403 316 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 SHHQ15465 462 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 TCTN1Q2MV58 587 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 ZC2HC1CQ53FD0 456 aaPredicted RBP15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 C9orf50Q5SZB4 431 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 APBB1IPQ7Z5R6 666 aaPredicted RBP15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 SYCP3Q8IZU3 236 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 GPT2Q8TD30 523 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 ERCC4Q92889 916 aaPredicted RBP15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 ACCSQ96QU6 501 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 ADPGKQ9BRR6 497 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 TCHPQ9BT92 498 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 TRIM6Q9C030 488 aaPredicted RBP15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 ST6GALNAC4Q9H4F1 302 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 SLC39A2Q9NP94 309 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 LRFN2Q9ULH4 789 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 TBX20Q9UMR3 447 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 PCDHA5Q9Y5H7 936 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 SLC4A7Q9Y6M7 1214 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 PTPRSQ13332 1948 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 CNTNAP2Q9UHC6 1331 aa15.94■□□□□ 0.14
NPLOC4-218ENST00000574964 N4BP3O15049 544 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 MGEA5O60502 916 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 PRPF6O94906 941 aaKnown RBP15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 MYBP10242 640 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 LIG4P49917 911 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 DSC3Q14574 896 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 KCNB1Q14721 858 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 AMHR2Q16671 573 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 ATF7IP2Q5U623 682 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 PRPF38BQ5VTL8 546 aaKnown RBP15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 SLC24A5Q71RS6 500 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 CDR2LQ86X02 465 aaPredicted RBP15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 MYOCDQ8IZQ8 938 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 CCDC51Q96ER9 411 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 GSDMAQ96QA5 445 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 FIZ1Q96SL8 496 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 TARS2Q9BW92 718 aaKnown RBP15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 TSPYL2Q9H2G4 693 aaPredicted RBP15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 CLSTN2Q9H4D0 955 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 RGS18Q9NS28 235 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 USP20Q9Y2K6 914 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 GBF1Q92538 1859 aa15.93■□□□□ 0.14
NPLOC4-218ENST00000574964 HNRNPDLO14979 420 aaKnown RBP15.92■□□□□ 0.14
NPLOC4-218ENST00000574964 RHOBTB3O94955 611 aa15.92■□□□□ 0.14
NPLOC4-218ENST00000574964 UPP2O95045 317 aa15.92■□□□□ 0.14
NPLOC4-218ENST00000574964 STAG3L1P0CL83 205 aa15.92■□□□□ 0.14
NPLOC4-218ENST00000574964 SKIP12755 728 aa15.92■□□□□ 0.14
NPLOC4-218ENST00000574964 HOXA11P31270 313 aaPredicted RBP15.92■□□□□ 0.14
NPLOC4-218ENST00000574964 WDR5P61964 334 aaKnown RBP15.92■□□□□ 0.14
NPLOC4-218ENST00000574964 L1TD1Q5T7N2 865 aaKnown RBP15.92■□□□□ 0.14
NPLOC4-218ENST00000574964 NT5DC1Q5TFE4 455 aa15.92■□□□□ 0.14
NPLOC4-218ENST00000574964 SLC27A1Q6PCB7 646 aa15.92■□□□□ 0.14
NPLOC4-218ENST00000574964 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.92■□□□□ 0.14
NPLOC4-218ENST00000574964 TAS1R3Q7RTX0 852 aa15.92■□□□□ 0.14
NPLOC4-218ENST00000574964 RTN4RL1Q86UN2 441 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms