RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 CNTNAP2Q9UHC6 1331 aa18.79■□□□□ 0.6
NUP88-210ENST00000574867 ACKR2O00590 384 aa18.79■□□□□ 0.6
NUP88-210ENST00000574867 EIF3DO15371 548 aaKnown RBP eCLIP18.79■□□□□ 0.6
NUP88-210ENST00000574867 PPP1R37O75864 691 aa18.79■□□□□ 0.6
NUP88-210ENST00000574867 AXLP30530 894 aa18.79■□□□□ 0.6
NUP88-210ENST00000574867 SARSP49591 514 aaKnown RBP18.79■□□□□ 0.6
NUP88-210ENST00000574867 NFX1Q12986 1120 aaKnown RBP18.79■□□□□ 0.6
NUP88-210ENST00000574867 CCDC183Q5T5S1 534 aa18.79■□□□□ 0.6
NUP88-210ENST00000574867 STRA6Q9BX79 667 aa18.79■□□□□ 0.6
NUP88-210ENST00000574867 KIAA1468Q9P260 1216 aa18.79■□□□□ 0.6
NUP88-210ENST00000574867 TBX20Q9UMR3 447 aa18.79■□□□□ 0.6
NUP88-210ENST00000574867 TSPAN1O60635 241 aa18.78■□□□□ 0.6
NUP88-210ENST00000574867 FGFR4P22455 802 aa18.78■□□□□ 0.6
NUP88-210ENST00000574867 AMHR2Q16671 573 aa18.78■□□□□ 0.6
NUP88-210ENST00000574867 PSRC1Q6PGN9 363 aaPredicted RBP18.78■□□□□ 0.6
NUP88-210ENST00000574867 TAS1R3Q7RTX0 852 aa18.78■□□□□ 0.6
NUP88-210ENST00000574867 MAP4K3Q8IVH8 894 aa18.78■□□□□ 0.6
NUP88-210ENST00000574867 DBF4BQ8NFT6 615 aa18.78■□□□□ 0.6
NUP88-210ENST00000574867 ERCC4Q92889 916 aaPredicted RBP18.78■□□□□ 0.6
NUP88-210ENST00000574867 HPS3Q969F9 1004 aa18.78■□□□□ 0.6
NUP88-210ENST00000574867 CHST12Q9NRB3 414 aa18.78■□□□□ 0.6
NUP88-210ENST00000574867 CASP5P51878 434 aa18.78■□□□□ 0.6
NUP88-210ENST00000574867 PRPF4BQ13523 1007 aaKnown RBP18.78■□□□□ 0.6
NUP88-210ENST00000574867 MRPL4Q9BYD3 311 aaKnown RBP18.78■□□□□ 0.6
NUP88-210ENST00000574867 SLC39A2Q9NP94 309 aa18.78■□□□□ 0.6
NUP88-210ENST00000574867 TET1Q8NFU7 2136 aa18.78■□□□□ 0.6
NUP88-210ENST00000574867 MYBP10242 640 aa18.77■□□□□ 0.6
NUP88-210ENST00000574867 ACTN1P12814 892 aa18.77■□□□□ 0.6
NUP88-210ENST00000574867 ZC2HC1CQ53FD0 456 aaPredicted RBP18.77■□□□□ 0.6
NUP88-210ENST00000574867 L1TD1Q5T7N2 865 aaKnown RBP18.77■□□□□ 0.6
NUP88-210ENST00000574867 EPM2AIP1Q7L775 607 aaPredicted RBP18.77■□□□□ 0.6
NUP88-210ENST00000574867 TRIML1Q8N9V2 468 aa18.77■□□□□ 0.6
NUP88-210ENST00000574867 VWCEQ96DN2 955 aa18.77■□□□□ 0.6
NUP88-210ENST00000574867 CCDC51Q96ER9 411 aa18.77■□□□□ 0.6
NUP88-210ENST00000574867 FGFBP2Q9BYJ0 223 aa18.77■□□□□ 0.6
NUP88-210ENST00000574867 EXOC7Q9UPT5 735 aa18.77■□□□□ 0.6
NUP88-210ENST00000574867 PIN4Q9Y237 131 aaKnown RBP18.77■□□□□ 0.6
NUP88-210ENST00000574867 EFCAB14O75071 495 aa18.77■□□□□ 0.59
NUP88-210ENST00000574867 KIF20AO95235 890 aa18.77■□□□□ 0.59
NUP88-210ENST00000574867 STK4Q13043 487 aa18.77■□□□□ 0.59
NUP88-210ENST00000574867 NOTUMQ6P988 496 aa18.77■□□□□ 0.59
NUP88-210ENST00000574867 KIAA0895Q8NCT3 520 aa18.77■□□□□ 0.59
NUP88-210ENST00000574867 ACCSQ96QU6 501 aa18.77■□□□□ 0.59
NUP88-210ENST00000574867 TMEM206Q9H813 350 aa18.77■□□□□ 0.59
NUP88-210ENST00000574867 BAIAP3O94812 1187 aa18.76■□□□□ 0.59
NUP88-210ENST00000574867 ZSCAN20P17040 1043 aaPredicted RBP18.76■□□□□ 0.59
NUP88-210ENST00000574867 MAGEA10P43363 369 aaPredicted RBP18.76■□□□□ 0.59
NUP88-210ENST00000574867 BMT2Q1RMZ1 405 aa18.76■□□□□ 0.59
NUP88-210ENST00000574867 TMEM132AQ24JP5 1023 aa18.76■□□□□ 0.59
NUP88-210ENST00000574867 ZNF658Q5TYW1 1059 aaPredicted RBP18.76■□□□□ 0.59
NUP88-210ENST00000574867 ZPBP2Q6X784 338 aa18.76■□□□□ 0.59
NUP88-210ENST00000574867 RBM43Q6ZSC3 357 aaKnown RBP18.76■□□□□ 0.59
NUP88-210ENST00000574867 TMX1Q9H3N1 280 aa18.76■□□□□ 0.59
NUP88-210ENST00000574867 MAN1B1Q9UKM7 699 aa18.76■□□□□ 0.59
NUP88-210ENST00000574867 MICAL3Q7RTP6 2002 aa18.76■□□□□ 0.59
NUP88-210ENST00000574867 H0YGN5 161 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 B4GALT5O43286 388 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 PIGRP01833 764 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 ARF4P18085 180 aaPredicted RBP18.75■□□□□ 0.59
NUP88-210ENST00000574867 IKBKEQ14164 716 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 CAVIN1Q6NZI2 390 aaKnown RBP18.75■□□□□ 0.59
NUP88-210ENST00000574867 ZNF507Q8TCN5 953 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 BICD1Q96G01 975 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 TMEM63CQ9P1W3 806 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 ABHD14A-ACY1A0A1B0GW23 586 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 HNRNPDLO14979 420 aaKnown RBP18.75■□□□□ 0.59
NUP88-210ENST00000574867 N4BP3O15049 544 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 ACRP10323 421 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 HOXA11P31270 313 aaPredicted RBP18.75■□□□□ 0.59
NUP88-210ENST00000574867 MORC3Q14149 939 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 COBLL1Q53SF7 1204 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 ATF7IP2Q5U623 682 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 GLIS3Q8NEA6 775 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 SCFD1Q8WVM8 642 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 PCDH10Q9P2E7 1040 aa18.75■□□□□ 0.59
NUP88-210ENST00000574867 A0A1B0GUA9 196 aa18.74■□□□□ 0.59
NUP88-210ENST00000574867 PRPF6O94906 941 aaKnown RBP18.74■□□□□ 0.59
NUP88-210ENST00000574867 EDN1P05305 212 aa18.74■□□□□ 0.59
NUP88-210ENST00000574867 LIG4P49917 911 aa18.74■□□□□ 0.59
NUP88-210ENST00000574867 DSC3Q14574 896 aa18.74■□□□□ 0.59
NUP88-210ENST00000574867 APBB1IPQ7Z5R6 666 aaPredicted RBP18.74■□□□□ 0.59
NUP88-210ENST00000574867 MYOCDQ8IZQ8 938 aa18.74■□□□□ 0.59
NUP88-210ENST00000574867 TARS2Q9BW92 718 aaKnown RBP18.74■□□□□ 0.59
NUP88-210ENST00000574867 TRAIPQ9BWF2 469 aa18.74■□□□□ 0.59
NUP88-210ENST00000574867 TSPYL2Q9H2G4 693 aaPredicted RBP18.74■□□□□ 0.59
NUP88-210ENST00000574867 C1orf112Q9NSG2 853 aa18.74■□□□□ 0.59
NUP88-210ENST00000574867 TNFSF13BQ9Y275 285 aa18.74■□□□□ 0.59
NUP88-210ENST00000574867 GDAQ9Y2T3 454 aa18.74■□□□□ 0.59
NUP88-210ENST00000574867 PDE4DIPQ5VU43 2346 aa18.74■□□□□ 0.59
NUP88-210ENST00000574867 TOM1L1O75674 476 aa18.73■□□□□ 0.59
NUP88-210ENST00000574867 FGBP02675 491 aa18.73■□□□□ 0.59
NUP88-210ENST00000574867 PPP1R2P41236 205 aa18.73■□□□□ 0.59
NUP88-210ENST00000574867 TWF2Q6IBS0 349 aaKnown RBP18.73■□□□□ 0.59
NUP88-210ENST00000574867 SLC27A1Q6PCB7 646 aa18.73■□□□□ 0.59
NUP88-210ENST00000574867 C16orf59Q7L2K0 433 aa18.73■□□□□ 0.59
NUP88-210ENST00000574867 GUF1Q8N442 669 aaKnown RBP18.73■□□□□ 0.59
NUP88-210ENST00000574867 CPB2Q96IY4 423 aa18.73■□□□□ 0.59
NUP88-210ENST00000574867 ACO2Q99798 780 aaKnown RBP18.73■□□□□ 0.59
NUP88-210ENST00000574867 ADAM2Q99965 735 aa18.73■□□□□ 0.59
NUP88-210ENST00000574867 ADPGKQ9BRR6 497 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms