RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 PTCRAQ6ISU1 281 aaPredicted RBP11.75□□□□□ -0.53
LITAF-216ENST00000574848 KCNT2Q6UVM3 1135 aa11.75□□□□□ -0.53
LITAF-216ENST00000574848 CATSPER4Q7RTX7 472 aa11.75□□□□□ -0.53
LITAF-216ENST00000574848 ADGRD2Q7Z7M1 963 aa11.75□□□□□ -0.53
LITAF-216ENST00000574848 EFHBQ8N7U6 833 aa11.75□□□□□ -0.53
LITAF-216ENST00000574848 ZNF558Q96NG5 402 aa11.75□□□□□ -0.53
LITAF-216ENST00000574848 POLR3CQ9BUI4 534 aaPredicted RBP11.75□□□□□ -0.53
LITAF-216ENST00000574848 TLR9Q9NR96 1032 aa11.75□□□□□ -0.53
LITAF-216ENST00000574848 CLDND1Q9NY35 253 aa11.75□□□□□ -0.53
LITAF-216ENST00000574848 TFIP11Q9UBB9 837 aaKnown RBP11.75□□□□□ -0.53
LITAF-216ENST00000574848 DBR1Q9UK59 544 aaKnown RBP11.75□□□□□ -0.53
LITAF-216ENST00000574848 RCOR1Q9UKL0 485 aa11.75□□□□□ -0.53
LITAF-216ENST00000574848 SYCE3A1L190 88 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 H3BQ06 376 aaPredicted RBP11.74□□□□□ -0.53
LITAF-216ENST00000574848 IL9P15248 144 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 IBSPP21815 317 aaPredicted RBP11.74□□□□□ -0.53
LITAF-216ENST00000574848 RPA1P27694 616 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 HOXA11P31270 313 aaPredicted RBP11.74□□□□□ -0.53
LITAF-216ENST00000574848 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.53
LITAF-216ENST00000574848 PTENP60484 403 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 ADAM15Q13444 863 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 CAPSQ13938 189 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 SF3A1Q15459 793 aaKnown RBP11.74□□□□□ -0.53
LITAF-216ENST00000574848 SPOUT1Q5T280 376 aaKnown RBP11.74□□□□□ -0.53
LITAF-216ENST00000574848 FAM173BQ6P4H8 233 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 MRPL10Q7Z7H8 261 aaKnown RBP11.74□□□□□ -0.53
LITAF-216ENST00000574848 CATSPER3Q86XQ3 398 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 FAM178BQ8IXR5 827 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 THNSL1Q8IYQ7 743 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 SLC39A11Q8N1S5 342 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 C4orf32Q8N8J7 132 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 RNF149Q8NC42 400 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 HELQQ8TDG4 1101 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 MRPS27Q92552 414 aaKnown RBP11.74□□□□□ -0.53
LITAF-216ENST00000574848 CCDC51Q96ER9 411 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 MSLNLQ96KJ4 702 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 CDCA3Q99618 268 aaPredicted RBP11.74□□□□□ -0.53
LITAF-216ENST00000574848 NUP62CLQ9H1M0 184 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 TSPY26PQ9H489 355 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 BMP2KQ9NSY1 1161 aaPredicted RBP11.74□□□□□ -0.53
LITAF-216ENST00000574848 PRKAG3Q9UGI9 489 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 NOL7Q9UMY1 257 aaKnown RBP11.74□□□□□ -0.53
LITAF-216ENST00000574848 FAM50BQ9Y247 325 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 CNTNAP2Q9UHC6 1331 aa11.74□□□□□ -0.53
LITAF-216ENST00000574848 INPPL1O15357 1258 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 TSPAN1O60635 241 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 MED24O75448 989 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 GLP2RO95838 553 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 SRGAP2CP0DJJ0 459 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 AXLP30530 894 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 GTF2F1P35269 517 aaKnown RBP eCLIP11.73□□□□□ -0.53
LITAF-216ENST00000574848 MBTD1Q05BQ5 628 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 DLX2Q07687 328 aaPredicted RBP11.73□□□□□ -0.53
LITAF-216ENST00000574848 SMAD4Q13485 552 aaKnown RBP11.73□□□□□ -0.53
LITAF-216ENST00000574848 TFDP1Q14186 410 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 STK38Q15208 465 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 AMHR2Q16671 573 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 UBXN11Q5T124 520 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 HAUS3Q68CZ6 603 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 GLB1LQ6UWU2 654 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 RNF169Q8NCN4 708 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 MCPH1Q8NEM0 835 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 ERMNQ8TAM6 284 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 ASAP3Q8TDY4 903 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 SPG21Q9NZD8 308 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 ZMYM2Q9UBW7 1377 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 PCDHB2Q9Y5E7 798 aa11.73□□□□□ -0.53
LITAF-216ENST00000574848 MEIS3P2A8K0S8 358 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 LAD1O00515 517 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 LINC01565O15544 149 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 EYA4O95677 639 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 ATP2B1P20020 1258 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 GLRA2P23416 452 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 PRPHP41219 470 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 TECP42680 631 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 ME1P48163 572 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 NASPP49321 788 aaPredicted RBP11.72□□□□□ -0.53
LITAF-216ENST00000574848 TOB1P50616 345 aaPredicted RBP11.72□□□□□ -0.53
LITAF-216ENST00000574848 ERVFC1P60507 584 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 COASYQ13057 564 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 KCNC3Q14003 757 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 ZNF174Q15697 407 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 SMAD2Q15796 467 aaKnown RBP11.72□□□□□ -0.53
LITAF-216ENST00000574848 DUSP6Q16828 381 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 RILPL1Q5EBL4 403 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 NOMO2Q5JPE7 1267 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 CDCA2Q69YH5 1023 aaPredicted RBP11.72□□□□□ -0.53
LITAF-216ENST00000574848 AGMOQ6ZNB7 445 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 IGSF22Q8N9C0 903 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 SMRP1Q8NCR6 262 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 CNNM3Q8NE01 707 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 PIGOQ8TEQ8 1089 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 LPPQ93052 612 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 PGBD4Q96DM1 585 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 CCDC43Q96MW1 224 aaKnown RBP11.72□□□□□ -0.53
LITAF-216ENST00000574848 NACC1Q96RE7 527 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 USP28Q96RU2 1077 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 NGRNQ9NPE2 291 aaKnown RBP11.72□□□□□ -0.53
LITAF-216ENST00000574848 TBC1D13Q9NVG8 400 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms