RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 CMTM4Q8IZR5 234 aa6.61□□□□□ -1.35
CDC27-216ENST00000574304 TGFBRAP1Q8WUH2 860 aa6.61□□□□□ -1.35
CDC27-216ENST00000574304 LMBR1Q8WVP7 490 aa6.61□□□□□ -1.35
CDC27-216ENST00000574304 RAX2Q96IS3 184 aa6.61□□□□□ -1.35
CDC27-216ENST00000574304 KRTAP4-9Q9BYQ8 210 aa6.61□□□□□ -1.35
CDC27-216ENST00000574304 TLR9Q9NR96 1032 aa6.61□□□□□ -1.35
CDC27-216ENST00000574304 C14orf119Q9NWQ9 140 aa6.61□□□□□ -1.35
CDC27-216ENST00000574304 MYRFQ9Y2G1 1151 aa6.61□□□□□ -1.35
CDC27-216ENST00000574304 SH3BP1Q9Y3L3 701 aa6.61□□□□□ -1.35
CDC27-216ENST00000574304 PHLDB1Q86UU1 1377 aa6.6□□□□□ -1.35
CDC27-216ENST00000574304 NRP1O14786 923 aa6.6□□□□□ -1.35
CDC27-216ENST00000574304 SPDYAQ5MJ70 313 aa6.6□□□□□ -1.35
CDC27-216ENST00000574304 MSL3Q8N5Y2 521 aaKnown RBP6.6□□□□□ -1.35
CDC27-216ENST00000574304 SH3RF3Q8TEJ3 882 aaPredicted RBP6.6□□□□□ -1.35
CDC27-216ENST00000574304 ARL8AQ96BM9 186 aa6.6□□□□□ -1.35
CDC27-216ENST00000574304 QRSL1Q9H0R6 528 aaKnown RBP6.6□□□□□ -1.35
CDC27-216ENST00000574304 DPP7Q9UHL4 492 aa6.6□□□□□ -1.35
CDC27-216ENST00000574304 ATP8A1Q9Y2Q0 1164 aa6.6□□□□□ -1.35
CDC27-216ENST00000574304 CAPN14A8MX76 684 aa6.59□□□□□ -1.35
CDC27-216ENST00000574304 LTA4HP09960 611 aaKnown RBP6.59□□□□□ -1.35
CDC27-216ENST00000574304 PUM1Q14671 1186 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDC27-216ENST00000574304 UBE3CQ15386 1083 aa6.59□□□□□ -1.35
CDC27-216ENST00000574304 SPRED1Q7Z699 444 aa6.59□□□□□ -1.35
CDC27-216ENST00000574304 GGNQ86UU5 652 aa6.59□□□□□ -1.35
CDC27-216ENST00000574304 ORAI2Q96SN7 254 aa6.59□□□□□ -1.35
CDC27-216ENST00000574304 TMEM127O75204 238 aa6.58□□□□□ -1.36
CDC27-216ENST00000574304 HIBADHP31937 336 aaKnown RBP6.58□□□□□ -1.36
CDC27-216ENST00000574304 WNT3AP56704 352 aa6.58□□□□□ -1.36
CDC27-216ENST00000574304 MRPS9P82933 396 aaKnown RBP6.58□□□□□ -1.36
CDC27-216ENST00000574304 CDK17Q00537 523 aa6.58□□□□□ -1.36
CDC27-216ENST00000574304 MEF2AQ02078 507 aaPredicted RBP6.58□□□□□ -1.36
CDC27-216ENST00000574304 FKBP15Q5T1M5 1219 aa6.58□□□□□ -1.36
CDC27-216ENST00000574304 SPTY2D1Q68D10 685 aaPredicted RBP6.58□□□□□ -1.36
CDC27-216ENST00000574304 AUTS2Q8WXX7 1259 aa6.58□□□□□ -1.36
CDC27-216ENST00000574304 SLC5A4Q9NY91 659 aa6.58□□□□□ -1.36
CDC27-216ENST00000574304 K7ESF4 209 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 CYP27B1O15528 508 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 PRAMEF4O60810 478 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 MTHFD2P13995 350 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 CASRP41180 1078 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 GPR3P46089 330 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 ERVK-21P61565 698 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 AMPD3Q01432 767 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 DUSP2Q05923 314 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 ELAVL1Q15717 326 aaKnown RBP6.57□□□□□ -1.36
CDC27-216ENST00000574304 TOR2AQ5JU69 321 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 MFSD5Q6N075 450 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 ABHD15Q6UXT9 468 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 ANKRD35Q8N283 1001 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 OR5M3Q8NGP4 307 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 PAWRQ96IZ0 340 aaKnown RBP6.57□□□□□ -1.36
CDC27-216ENST00000574304 ZNF512Q96ME7 567 aaPredicted RBP6.57□□□□□ -1.36
CDC27-216ENST00000574304 ENKD1Q9H0I2 346 aa6.57□□□□□ -1.36
CDC27-216ENST00000574304 PUS7LQ9H0K6 701 aaKnown RBP6.57□□□□□ -1.36
CDC27-216ENST00000574304 HECAQ9UBI9 543 aaPredicted RBP6.57□□□□□ -1.36
CDC27-216ENST00000574304 WASHC2AQ641Q2 1341 aa6.56□□□□□ -1.36
CDC27-216ENST00000574304 MATN3O15232 486 aa6.56□□□□□ -1.36
CDC27-216ENST00000574304 STC2O76061 302 aa6.56□□□□□ -1.36
CDC27-216ENST00000574304 ACRV1P26436 265 aa6.56□□□□□ -1.36
CDC27-216ENST00000574304 CCT2P78371 535 aaKnown RBP6.56□□□□□ -1.36
CDC27-216ENST00000574304 SRSF2Q01130 221 aaKnown RBP6.56□□□□□ -1.36
CDC27-216ENST00000574304 MUM1Q2TAK8 710 aa6.56□□□□□ -1.36
CDC27-216ENST00000574304 C19orf54Q5BKX5 351 aa6.56□□□□□ -1.36
CDC27-216ENST00000574304 KCNK18Q7Z418 384 aa6.56□□□□□ -1.36
CDC27-216ENST00000574304 NECAB2Q7Z6G3 386 aa6.56□□□□□ -1.36
CDC27-216ENST00000574304 THEMISQ8N1K5 641 aaPredicted RBP6.56□□□□□ -1.36
CDC27-216ENST00000574304 CNTD1Q8N815 330 aa6.56□□□□□ -1.36
CDC27-216ENST00000574304 TSPEARQ8WU66 669 aa6.56□□□□□ -1.36
CDC27-216ENST00000574304 SNX33Q8WV41 574 aa6.56□□□□□ -1.36
CDC27-216ENST00000574304 MIEF2Q96C03 454 aa6.56□□□□□ -1.36
CDC27-216ENST00000574304 CCM2LQ9NUG4 571 aaPredicted RBP6.56□□□□□ -1.36
CDC27-216ENST00000574304 DNAJC28Q9NX36 388 aa6.56□□□□□ -1.36
CDC27-216ENST00000574304 GIT1Q9Y2X7 761 aa6.56□□□□□ -1.36
CDC27-216ENST00000574304 GYPEP15421 78 aa6.55□□□□□ -1.36
CDC27-216ENST00000574304 TNFRSF1AP19438 455 aa6.55□□□□□ -1.36
CDC27-216ENST00000574304 CDK11BP21127 795 aaKnown RBP6.55□□□□□ -1.36
CDC27-216ENST00000574304 CTSSP25774 331 aa6.55□□□□□ -1.36
CDC27-216ENST00000574304 KLF1Q13351 362 aaPredicted RBP6.55□□□□□ -1.36
CDC27-216ENST00000574304 FAM214AQ32MH5 1076 aa6.55□□□□□ -1.36
CDC27-216ENST00000574304 NRN1LQ496H8 165 aa6.55□□□□□ -1.36
CDC27-216ENST00000574304 USP39Q53GS9 565 aaKnown RBP6.55□□□□□ -1.36
CDC27-216ENST00000574304 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
CDC27-216ENST00000574304 RNF207Q6ZRF8 634 aa6.55□□□□□ -1.36
CDC27-216ENST00000574304 ELOA2Q8IYF1 753 aaPredicted RBP6.55□□□□□ -1.36
CDC27-216ENST00000574304 EXTL1Q92935 676 aa6.55□□□□□ -1.36
CDC27-216ENST00000574304 IFT122Q9HBG6 1241 aa6.55□□□□□ -1.36
CDC27-216ENST00000574304 CFBP00751 764 aa6.54□□□□□ -1.36
CDC27-216ENST00000574304 CDKN1CP49918 316 aaPredicted RBP6.54□□□□□ -1.36
CDC27-216ENST00000574304 ADRM1Q16186 407 aa6.54□□□□□ -1.36
CDC27-216ENST00000574304 BTNL9Q6UXG8 535 aa6.54□□□□□ -1.36
CDC27-216ENST00000574304 GSPT2Q8IYD1 628 aaKnown RBP6.54□□□□□ -1.36
CDC27-216ENST00000574304 GLB1L3Q8NCI6 653 aaPredicted RBP6.54□□□□□ -1.36
CDC27-216ENST00000574304 FATE1Q969F0 183 aa6.54□□□□□ -1.36
CDC27-216ENST00000574304 IL17RAQ96F46 866 aa6.54□□□□□ -1.36
CDC27-216ENST00000574304 MENTQ9BUN1 341 aa6.54□□□□□ -1.36
CDC27-216ENST00000574304 ACE2Q9BYF1 805 aaPredicted RBP6.54□□□□□ -1.36
CDC27-216ENST00000574304 TRIM8Q9BZR9 551 aa6.54□□□□□ -1.36
CDC27-216ENST00000574304 EPC1Q9H2F5 836 aa6.54□□□□□ -1.36
CDC27-216ENST00000574304 RPTORQ8N122 1335 aa6.53□□□□□ -1.36
CDC27-216ENST00000574304 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms