RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 CWH43Q9H720 699 aa11.2□□□□□ -0.62
HCFC1R1-206ENST00000574151 RTEL1Q9NZ71 1219 aa11.2□□□□□ -0.62
HCFC1R1-206ENST00000574151 HOOK1Q9UJC3 728 aaKnown RBP11.2□□□□□ -0.62
HCFC1R1-206ENST00000574151 LAMA4Q16363 1823 aa11.2□□□□□ -0.62
HCFC1R1-206ENST00000574151 DOCK6Q96HP0 2047 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 GREB1Q4ZG55 1949 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 NID2Q14112 1375 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 STK36Q9NRP7 1315 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 UQCRHLA0A096LP55 91 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 BECN2A8MW95 431 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 CCP110O43303 1012 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 N4BP1O75113 896 aaKnown RBP11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 CXCL14O95715 111 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 UQCRHP07919 91 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 NR3C2P08235 984 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 KRT17Q04695 432 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 NONOQ15233 471 aaKnown RBP eCLIP11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 SAFBQ15424 915 aaKnown RBP eCLIP11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 FOXD4L6Q3SYB3 417 aaPredicted RBP11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 UTP14CQ5TAP6 766 aaKnown RBP11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 ADALQ6DHV7 355 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 FOXD4L3Q6VB84 417 aaPredicted RBP11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 PRR23BQ6ZRT6 265 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 RSPH3Q86UC2 560 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 TRIM50Q86XT4 487 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 ELOA2Q8IYF1 753 aaPredicted RBP11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 FAM177A1Q8N128 213 aaPredicted RBP11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 STAG2Q8N3U4 1231 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 CCDC148Q8NFR7 591 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 GPKOWQ92917 476 aaPredicted RBP eCLIP11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 CUL5Q93034 780 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 KIF12Q96FN5 646 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 TIGD1Q96MW7 591 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 FTHL17Q9BXU8 183 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 MAF1Q9H063 256 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 BRMS1Q9HCU9 246 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 IMPACTQ9P2X3 320 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 DACH1Q9UI36 760 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 PADI3Q9ULW8 664 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 MRPL11Q9Y3B7 192 aaKnown RBP11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 R3HCC1Q9Y3T6 440 aaKnown RBP11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 MTF2Q9Y483 593 aaPredicted RBP11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 AKAP13Q12802 2813 aa11.19□□□□□ -0.62
HCFC1R1-206ENST00000574151 WDFY3Q8IZQ1 3526 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 SMTNL1A8MU46 457 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 LAG3P18627 525 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 GNA11P29992 359 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 CDC27P30260 824 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 TMEM62Q0P6H9 643 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 GNL2Q13823 731 aaKnown RBP11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 UBXN2BQ14CS0 331 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 CDC37Q16543 378 aaPredicted RBP11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 LETM2Q2VYF4 491 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 GPR149Q86SP6 731 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 CABP7Q86V35 215 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 TEX2Q8IWB9 1127 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 SRBD1Q8N5C6 995 aaKnown RBP11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 SAMD3Q8N6K7 520 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 AUTS2Q8WXX7 1259 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 C8orf76Q96K31 380 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 PIGSQ96S52 555 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 JMJD4Q9H9V9 463 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 NCOA5Q9HCD5 579 aaKnown RBP11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 C6orf50Q9HD87 102 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 DZANK1Q9NVP4 752 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 MAP3K20Q9NYL2 800 aaKnown RBP11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 ORC3Q9UBD5 711 aaPredicted RBP11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 PAXBP1Q9Y5B6 917 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 PCDHA1Q9Y5I3 950 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 MORC2Q9Y6X9 1032 aaPredicted RBP11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 DMXL2Q8TDJ6 3036 aa11.18□□□□□ -0.62
HCFC1R1-206ENST00000574151 TICRRQ7Z2Z1 1910 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 ABCB11O95342 1321 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 NOP56O00567 594 aaKnown RBP11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 PLEKHA8P1O95397 391 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 RETP07949 1114 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 UBA1P22314 1058 aaKnown RBP11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 SARSP49591 514 aaKnown RBP11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 FOXC1Q12948 553 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 PAK2Q13177 524 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 SNW1Q13573 536 aaKnown RBP11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 SF3A1Q15459 793 aaKnown RBP11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 CSRP2Q16527 193 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 TMEM266Q2M3C6 531 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 ANO6Q4KMQ2 910 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 LAIR1Q6GTX8 287 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 GALNT17Q6IS24 598 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 KCNT2Q6UVM3 1135 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 HEATR3Q7Z4Q2 680 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 FERMT3Q86UX7 667 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 PLA2G4DQ86XP0 818 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 CMTR1Q8N1G2 835 aaKnown RBP11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 KIAA1524Q8TCG1 905 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 ZBTB10Q96DT7 871 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 TRIM5Q9C035 493 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 SH3GLB2Q9NR46 395 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 EVPLQ92817 2033 aa11.17□□□□□ -0.62
HCFC1R1-206ENST00000574151 LOC400499M0QZD8 3231 aa11.16□□□□□ -0.62
HCFC1R1-206ENST00000574151 KANSL1LA0AUZ9 987 aa11.16□□□□□ -0.62
HCFC1R1-206ENST00000574151 FAM170BA6NMN3 283 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms