RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 ANKRD54Q6NXT1 300 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 SYCE2Q6PIF2 218 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 APOA5Q6Q788 366 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 ABHD15Q6UXT9 468 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 NIPA1Q7RTP0 329 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 FAM228AQ86W67 206 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 MICU3Q86XE3 530 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 RAB11FIP4Q86YS3 637 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 CCDC60Q8IWA6 550 aaPredicted RBP6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 THNSL1Q8IYQ7 743 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 ANKK1Q8NFD2 765 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 CRYGNQ8WXF5 182 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 PGBD1Q96JS3 809 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 NEK1Q96PY6 1258 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 KRTAP3-3Q9BYR6 98 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 KRTAP3-2Q9BYR7 98 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 ANO3Q9BYT9 981 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 CWH43Q9H720 699 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 ELAC1Q9H777 363 aaKnown RBP6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 TYW1Q9NV66 732 aaKnown RBP6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 TMEM161AQ9NX61 479 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 TMEM260Q9NX78 707 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 ST3GAL5Q9UNP4 418 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 IGLV3-22A0A075B6J6 115 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 HIDE1A8MVS5 230 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 FAM86B1E9PN63 330 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 hCG_1984214I3L0E3 225 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 M0R2N6 131 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 BACH1O14867 736 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 SLC27A2O14975 620 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 DHX15O43143 795 aaKnown RBP6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 GPR32O75388 356 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 KIF20AO95235 890 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 FAM86B2P0C5J1 330 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 SRGAP2BP0DMP2 458 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 FGFR1P11362 822 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 HOXB8P17481 243 aaPredicted RBP6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 ATP4AP20648 1035 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 IBSPP21815 317 aaPredicted RBP6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 AVPR2P30518 371 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 ADCY7P51828 1080 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 APOBRQ0VD83 1088 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 KIZQ2M2Z5 673 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 SPOUT1Q5T280 376 aaKnown RBP6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 RNF20Q5VTR2 975 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 PLPP4Q5VZY2 271 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 ADGRD1Q6QNK2 874 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 CAPN12Q6ZSI9 719 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 CACTIN-AS1Q8N1I8 211 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 ZNF713Q8N859 430 aaPredicted RBP6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 MRPS27Q92552 414 aaKnown RBP6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 OSMRQ99650 979 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 TCF25Q9BQ70 676 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 LRRC2Q9BYS8 371 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 LSG1Q9H089 658 aaKnown RBP6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 TMEM117Q9H0C3 514 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 IRF2BPLQ9H1B7 796 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 ATP6V0A4Q9HBG4 840 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 NGRNQ9NPE2 291 aaKnown RBP6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 ZNF302Q9NR11 478 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 RNF19AQ9NV58 838 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 FAM86C1Q9NVL1 165 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 MYO15AQ9UKN7 3530 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 KMT2EQ8IZD2 1858 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 PLXNA4Q9HCM2 1894 aa6.83□□□□□ -1.32
CACNA1A-203ENST00000573891 FNDC1Q4ZHG4 1894 aaPredicted RBP6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 ESPNB1AK53 854 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 PROB1E7EW31 1015 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 DDX39AO00148 427 aaKnown RBP6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 IPO5O00410 1097 aaKnown RBP6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 GFRA3O60609 400 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 PDGFBP01127 241 aaPredicted RBP6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 VTNP04004 478 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 CYP3A4P08684 503 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 PPM1AP35813 382 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 TECP42680 631 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 USP4Q13107 963 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 NECTIN1Q15223 517 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 CREB3L3Q68CJ9 461 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 SWSAP1Q6NVH7 229 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 MIS18BP1Q6P0N0 1132 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 KCNT2Q6UVM3 1135 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 LRRC55Q6ZSA7 311 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 PLA2G4DQ86XP0 818 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 LRRC43Q8N309 656 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 LINC01465Q8N7H1 131 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 SNRNP27Q8WVK2 155 aaKnown RBP6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 DRC1Q96MC2 740 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 ZNF558Q96NG5 402 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 CASD1Q96PB1 797 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 MAP7D2Q96T17 732 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 HINFPQ9BQA5 517 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 GLT8D2Q9H1C3 349 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 ENTPD7Q9NQZ7 604 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 RBM28Q9NW13 759 aaKnown RBP6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 BARHL2Q9NY43 387 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 PUF60Q9UHX1 559 aaKnown RBP6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 CDH22Q9UJ99 828 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 SORCS3Q9UPU3 1222 aa6.82□□□□□ -1.32
CACNA1A-203ENST00000573891 HCFC2Q9Y5Z7 792 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms